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FASTA Sequence PDB Format mmCIF Format
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7EA8

Human setd2 bound to a nucleosome containing oncohistone mutations

PDB DOI: 10.2210/pdb7ea8/pdb

Classification: GENE REGULATION
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2021-03-06
Deposition Author(s): Jing, H. , Liu, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Literature

Human setd2 bound to a nucleosome containing oncohistone mutations

Jing, H. , Liu, Y.

Primary Citation of Related Structures: 7EA8


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone-lysine N-methyltransferase SETD2 L 245 Homo Sapiens , Synthetic Construct DDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVS
Histone H3.3 A 101 Homo Sapiens , Synthetic Construct GGVMKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
Histone H3.3 E 101 Homo Sapiens , Synthetic Construct GGVMKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
Histone H4 B 78 Homo Sapiens , Synthetic Construct DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
Histone H4 F 78 Homo Sapiens , Synthetic Construct DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG
Histone H2A type 1-D C 104 Homo Sapiens , Synthetic Construct AKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLP
Histone H2A type 1-D G 104 Homo Sapiens , Synthetic Construct AKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLP
Histone H2B type 2-E D 125 Homo Sapiens , Synthetic Construct PEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK
Histone H2B type 2-E H 125 Homo Sapiens , Synthetic Construct PEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
601-DNA i 122 NA CGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCA
601-DNA j 122 NA TGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2021-03-06
Deposition Author(s): Jing, H. , Liu, Y.