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FASTA Sequence PDB Format mmCIF Format
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7DN2

Acidic stable capsid structure of helicobacter pylori bacteriophage khp30

PDB DOI: 10.2210/pdb7dn2/pdb

Classification: VIRUS
Organism(s): Helicobacter Pylori Bacteriophage Khp30

Deposited: 2020-12-08
Deposition Author(s): Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

7dn2
Literature

Acidic stable capsid structure of helicobacter pylori bacteriophage khp30

Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.

Primary Citation of Related Structures: 7DN2


Proteins
Molecule Chains Sequence Length Organism Sequence
Major structural protein ORF14 A 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 B 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 C 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 D 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 E 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 F 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 G 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 H 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Major structural protein ORF14 I 381 Helicobacter Pylori Bacteriophage Khp30 MLEKLNNINFNNISNNLNLGIEVGREIQNASWIKSPFFSITGTGADRGVRLFSVASQQPFRPRIKAQLSGSGVSGNTDFEANYDNLEILSQTIYPDAFGNSLRSKIKAYSELERIDFIKESVDSLTTWMNEERDKRIVASLTNDFTNYLYTQTMNVATIRKAIFHARNGLKGDNSKAFPIKPIRATMQSVGNVMVQNTSYIILLDSYQANQLKADSEFKELRKLYAFAGEDKGMLYSGLLGVIDNCPVIDAGVWNKFNVGMPNSSISDSDFMRYLNKANVSSIVTPRQFKEKLNQEKDEKKRSINKEISIGCLIGASAVLLAGSKETRFYIDETVDAGRKSLVGVDCLLGVSKARYQSTDGVVTPYDNQDYAVIGLVSDME
Cement protein gp15 1 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 2 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 3 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 4 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 5 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 6 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 7 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 8 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Cement protein gp15 9 126 Helicobacter Pylori Bacteriophage Khp30 MKQKVHSVSYLAKAEFKFNNGVYNLVALPSGAEVVKVSLEVVGNPIATSTTSVSVGFEDETTKNYFLTLDNLAVDDASKKHTTSAKDYTATSNKVVVAEVKNANDNNVKGVLRVLYFLPSVIEVEY
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-12-08
Deposition Author(s): Iwasaki, K. , Kamiya, R. , Matsuzaki, S. , Miyazaki, N. , Murata, K. , Uchiyama, J.