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7D69

Cryo-em structure of the nucleosome containing giardia histones

PDB DOI: 10.2210/pdb7d69/pdb

Classification: NUCLEAR PROTEIN
Organism(s): Giardia Intestinalis , Synthetic Construct

Deposited: 2020-09-29
Deposition Author(s): Kurumizaka, H. , Sato, S. , Takizawa, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.57 Å

7d69
Literature

Cryo-em structure of the nucleosome containing giardia histones

Kurumizaka, H. , Sato, S. , Takizawa, Y.

Primary Citation of Related Structures: 7D69


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3 A 149 Giardia Intestinalis , Synthetic Construct GSHMARTKHTARKTTSATKAPRKTIARKAARKTASSTSGIKKTGRKKQGMVAVKEIKKYQKSTDLLIRKLPFSKLVRDIVTSGLSKSDIRFQGAAVEALQESAENYIISLFVDTQLCAEHAKRVTIMKPDMELATRIGKRIEPEYRKGK
Histone H3 E 149 Giardia Intestinalis , Synthetic Construct GSHMARTKHTARKTTSATKAPRKTIARKAARKTASSTSGIKKTGRKKQGMVAVKEIKKYQKSTDLLIRKLPFSKLVRDIVTSGLSKSDIRFQGAAVEALQESAENYIISLFVDTQLCAEHAKRVTIMKPDMELATRIGKRIEPEYRKGK
Histone H4 B 102 Giardia Intestinalis , Synthetic Construct GSHMSGKGKGKGYGKSKRHSKEKDTLGGITKPAIRRLARRGGVKRISSTIYQQTREVLKAFLEVVLRDSLTYTEHGQRKTVTSQDVVYALKRQGRTLYGFGI
Histone H4 F 102 Giardia Intestinalis , Synthetic Construct GSHMSGKGKGKGYGKSKRHSKEKDTLGGITKPAIRRLARRGGVKRISSTIYQQTREVLKAFLEVVLRDSLTYTEHGQRKTVTSQDVVYALKRQGRTLYGFGI
Histone H2B D 133 Giardia Intestinalis , Synthetic Construct GSHMSKVETKRLMKKTEAGDKGDAKRKHKRHETYATYIYKVLRSENIRSEADTDLGISNKGMEVMNSLVNDLFERIASEASNLAKISKRNTIGKKDIESAAKLVIPGEIGRLIRDEADKALSKFTSSKESTKK
Histone H2B H 133 Giardia Intestinalis , Synthetic Construct GSHMSKVETKRLMKKTEAGDKGDAKRKHKRHETYATYIYKVLRSENIRSEADTDLGISNKGMEVMNSLVNDLFERIASEASNLAKISKRNTIGKKDIESAAKLVIPGEIGRLIRDEADKALSKFTSSKESTKK
Histone H2A C 127 Giardia Intestinalis , Synthetic Construct GSHMSTKPVKDNSKMKSRSARAGISFPIGRIHRHLREGRYAERISSDAPVYLAAVLENVVAEVFREACNHRDKKSQKRIVPNHILTALRKDKELATIFANVTIREGGVARSAKEGREGKGSHRSQDL
Histone H2A G 127 Giardia Intestinalis , Synthetic Construct GSHMSTKPVKDNSKMKSRSARAGISFPIGRIHRHLREGRYAERISSDAPVYLAAVLENVVAEVFREACNHRDKKSQKRIVPNHILTALRKDKELATIFANVTIREGGVARSAKEGREGKGSHRSQDL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
601L DNA (145-MER) i 145 NA ATCACAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGGAATCCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTGTGAT
601L DNA (145-MER) j 145 NA ATCACAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGGATTCCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTGTGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-09-29
Deposition Author(s): Kurumizaka, H. , Sato, S. , Takizawa, Y.