7D3C
The newly emerged sars-like coronavirus hcov-emc also has an ""achilles' heel"": current effective inhibitor targeting a 3c-like protease
PDB DOI: 10.2210/pdb7d3c/pdb
Classification: VIRAL PROTEIN Organism(s): Middle East Respiratory Syndrome-Related Coronavirus , Synthetic Construct
Deposited: 2020-09-18 Deposition Author(s): Ren, Z. , Yan, L.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.2 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| 3C-like proteinase | B | 306 | Middle East Respiratory Syndrome-Related Coronavirus , Synthetic Construct | SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDDTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPSTPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTDKYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDMLAVKTGVAIEQLLYAIQQLYTGFQGKQILGSTMLEDEFTPEDVNMQIMGVVMQ |
| 3C-like proteinase | A | 306 | Middle East Respiratory Syndrome-Related Coronavirus , Synthetic Construct | SGLVKMSHPSGDVEACMVQVTCGSMTLNGLWLDDTVWCPRHVMCPADQLSDPNYDALLISMTNHSFSVQKHIGAPANLRVVGHAMQGTLLKLTVDVANPSTPAYTFTTVKPGAAFSVLACYNGRPTGTFTVVMRPNYTIKGSFLCGSCGSVGYTKEGSVINFCYMHQMELANGTHTGSAFDGTMYGAFMDKQVHQVQLTDKYCSVNVVAWLYAAILNGCAWFVKPNRTSVVSFNEWALANQFTEFVGTQSVDMLAVKTGVAIEQLLYAIQQLYTGFQGKQILGSTMLEDEFTPEDVNMQIMGVVMQ |
| N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | C | 6 | Middle East Respiratory Syndrome-Related Coronavirus , Synthetic Construct | XAVLXX |
| N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-N~1~-((1R,2Z)-4-(BENZYLOXY)-4-OXO-1-{[(3R)-2-OXOPYRROLIDIN-3-YL]METHYL}BUT-2-ENYL)-L-LEUCINAMIDE | E | 6 | Middle East Respiratory Syndrome-Related Coronavirus , Synthetic Construct | XAVLXX |
Experimental Data
Method: X-RAY DIFFRACTION