Synechocystis cas1-cas2-prespacerl complex
PDB DOI: 10.2210/pdb7cr8/pdb
Classification: IMMUNE SYSTEM/DNA Organism(s): Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct
Deposited: 2020-08-12 Deposition Author(s): Chen, Q. , Yu, Y.
Proteins | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
CRISPR-associated endonuclease Cas1 | I | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | J | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | K | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | L | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | Q | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | R | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | S | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | T | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | A | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | B | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | C | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endonuclease Cas1 | D | 336 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMSTLYLTQPDAVLSKKHEAFHVALKQEDGSWKKQPIPAQTLEDIVLLGYPSITGEALGYALELGLPVHYLTQFGKYVGSALPSESRNGQLRLAQFRAHEDPIQRLDIVKAFVKGKVHNQYNLLYRRGQVDNPLKGRGKLVMRQQTLEQVRGIEGLAAREYFASWQEMLGHEWTFTGRFRRPPTDPVNALLSFGYGLLRTQVTAAVHIAGLDPYIGFLHETTRGQPAMILDLMEEFRALVADSVVLTVLKQREIQRQDFTESLGAFRLTDSATKTFLGAFDRKLSSEFKHPIFNYKCTYRRAIELQARLLARHLQEGVVYEPLVIR |
CRISPR-associated endoribonuclease Cas2 1 | M | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
CRISPR-associated endoribonuclease Cas2 1 | N | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
CRISPR-associated endoribonuclease Cas2 1 | U | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
CRISPR-associated endoribonuclease Cas2 1 | V | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
CRISPR-associated endoribonuclease Cas2 1 | E | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
CRISPR-associated endoribonuclease Cas2 1 | F | 105 | Synechocystis Sp. (Strain Pcc 6803 / Kazusa) , Synthetic Construct | GASGSGTGSGSMLYLIIYDVPATKAGNKRRTRLFDLLSGYGKWRQFSVFECFLSVKQFAKLQTAMEKLIKLDEDAVCIYVLDENTVQRTITYGTPQPEKPGSIII |
Nucleic Acids / Hybrid | ||||
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Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (36-MER) | o | 36 | NA | TTTTTTTGTGCCCCTGGCGGTCGCTTTCAAGTTTTT |
DNA (36-MER) | w | 36 | NA | TTTTTTTGTGCCCCTGGCGGTCGCTTTCAAGTTTTT |
DNA (36-MER) | g | 36 | NA | TTTTTTTGTGCCCCTGGCGGTCGCTTTCAAGTTTTT |
DNA (36-MER) | p | 36 | NA | TTTTTCTTGAAAGCGACCGCCAGGGGCACAATTTTT |
DNA (36-MER) | x | 36 | NA | TTTTTCTTGAAAGCGACCGCCAGGGGCACAATTTTT |
DNA (36-MER) | h | 36 | NA | TTTTTCTTGAAAGCGACCGCCAGGGGCACAATTTTT |
Method: X-RAY DIFFRACTION