Crystal structure of sars-cov-2 rbd in complex with a neutralizing antibody fab
PDB DOI: 10.2210/pdb7cjf/pdb
Classification: VIRAL PROTEIN Organism(s): Salmonella Enterica , Gammaretrovirus
Deposited: 2020-07-10 Deposition Author(s): Fu, D. , Guo, Y. , Li, X. , Rao, Z. , Schweizer, L. , Zhang, G. , Zhang, H.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
antibody heavy chain | A | 228 | Salmonella Enterica , Gammaretrovirus | EVQLVESGGGLIQPGGSLRLSCAASGFIVSSNYMSWVRQAPGKGLEWVSIIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLQELGSLDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCP |
antibody light chain | B | 214 | Salmonella Enterica , Gammaretrovirus | DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQEANSFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Spike protein S1 | C | 194 | Salmonella Enterica , Gammaretrovirus | NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP |
Method: X-RAY DIFFRACTION