7BKD
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure)
PDB DOI: 10.2210/pdb7bkd/pdb
Classification: OXIDOREDUCTASE Organism(s): Methanospirillum Hungatei Jf-1
Deposited: 2021-01-15 Deposition Author(s): Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure)
Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.
Primary Citation of Related Structures: 7BKD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CoB--CoM heterodisulfide reductase iron-sulfur subunit A | A | 671 | Methanospirillum Hungatei Jf-1 | MAENTEPRIGVFVCHCGTNIAGSMSIDDVVNYAKTLPYVAVADQYQYMCSTPGQKKIDDAIKEYNLTGVVVAACSPRLHEPTFRTATKEGGLNPFRFEMANIREQNSWVHMHGMWDEATQKAKDQVRMAVAKAAKLEDLVPKSVPVEKTAMVVGGGVAGMQAALDLASAGIKTYLIERTPTIGGRMSQLDKTFPTLDCSQCILTPKMVDVGRHPNIEMMTYTEVEKVEGYIGNFDVTLRKKARGVLTPTEATAKGIVGGGCNGCGDCSAVCPVIKPNPFEMGMAPRKAIYIYHAQVMPLIYTVDFDSCVKCGLCVEACGDKKAIDLEMQDEFITVKVGTAVLATGYELFPIENKREWGYKQFDNVINALEFERLICASGPTGGHLVRPSDGKTPMKVGFVLCAGSRDNTGIGKPYCSRFCCMYSLKHAHQIMEKIPGAVAYLFYMDIRSFGKMYEEFYYRIQHEGAKFIRGRVANVLEDKETKNLHVFTEDTLLGRPVDVEVDLLVLAAAVQPNEGANELRKKFGVSASQDGWMLEAHPKLNPCGTTTAGVFLAGVCQGPKDIPDTVAQAEGAASAASIPIHMGEVELEPYFAMCIDELCAGCGMCVNLCPYSALSLGEKNGRTVMVVTEAKCKGCGTCGGFCPGGAIKMQHFTTPQIVAQIDAFFAGGEQ |
| CoB--CoM heterodisulfide reductase subunit C | C | 191 | Methanospirillum Hungatei Jf-1 | MAAKSYNIPELDKKLADRRYHLSDTNPEFTQKILKTSRTIANMCYQCGTCTGSCPSAPRSSYRIRLFMRRCVLGLENEALTDPDLWLCTTCYSCTDRCPRDIAPTDVIMAMRNLAFKRDIVPKNFLQTVQLIYNSGHGVPNNDVNRAARTKLGLPADPPTTHSYPEFVKGIQKIIDHYELKENADRILKGD |
| CoB--CoM heterodisulfide reductase subunit B | B | 296 | Methanospirillum Hungatei Jf-1 | MHEYAFFLGCIAPNRYPGCEASAIKTSEKVGIKLLPLKGASCCPAPGAFGSIDLNVWYAMAARNLVLAEEMKKDIALICNGCYKSIWEVNHILKHNDELRDNVNEVLAEIDMQFKGTIDVWHLAELYYDDKVCGVQKIKDSVTTPLSGAKVAAHYGCHLMKPKKERHFGDTENPMWFEELIGALGAEPIQYRNKMQCCGAGGGVRGYDIVHALDITNEKLINIQEAGADAITELCPFCQLQFDRGQIEIKEKFGDVYNIPVLHYNELLGLAQGMSPQDLALDLHAIDCTPFLQKVL |
| F420-non-reducing hydrogenase subunit D | F | 140 | Methanospirillum Hungatei Jf-1 | MADDWKPQILAIICNWCSYAGADLAGGARIQYPPTVRAIRVMCTGRVDMLFILKAFVEGADGVLVSGCHFGDCHYLEGNYKAAKRMFMIKNLLRNIGLDDRRFRMTFVSASEGAKWGMVMEDVTNTIKELGPSPIKEFKK |
| Formate dehydrogenase, beta subunit (F420) | E | 414 | Methanospirillum Hungatei Jf-1 | MAAKGDMLYAWAKDAEIQKKGECGGAVTALLKHALETKMVDAVVAIKKGKDLYDAVPTVITNPEDIIQTAGSLHCGTLLIPKLIKKYLNGAKDMKLAVTCKGCDAMAFYELAKRNQINLDNIIMIGVNCGGSVSPVTARKMISNKFGVDPDTVHKEEIDKGQFIIEYEGGHKGIKIDELEEEGYGRRSNCRRCKMKIPRQADIAAGNWGVIGDKAGKATFLEICSEKGANLVNSAQSKGALEISPADPKGIDIRAKVEKAMFNLGDEWRHRDFEGMGKGKDRLKLMMSESSKCIKCYACVEACPICYCIECSTKKPWYIAPGVLPTSFMFHLIRFAHVSDSCINCGQCEELCPMEIPNALFMHSQQVEIEKMFGHIPGQDMTPPIHAFVEEKAERARLDATGTDSIYTNIFTDE |
| Formate dehydrogenase | D | 686 | Methanospirillum Hungatei Jf-1 | MSENSEIMKYVATTCPYCGVGCTLNLVVSNGKVVGVEPNQRSPINEGKLCPKGVTCWEHIHSPDRLTTPLIKKDGKFIEASWDEALDLVAKNLKVIYDKHGPKGLGFQTSCRTVNEDCYIFQKFARVGFKTNNVDNCARICHGPSVAGLSLSFGSGAATNGFEDALNADLILIWGSNAVEAHPLAGRRIAQAKKKGIQIIAVDPRYTMTARLADTYVRFNPSTHIALANSMMYWIIKEGLEDKKFIQDRVNGFEDLKKTVENYADAEAIHGVPLDVVKDIAFRYAKAKNAVIIYCLGITELTTGTDNVRSMGNLALLTGNVGREGVGVNPLRGQNNVQGACDMGAYPNVYSGYQKCEVAENRAKMEKAWSVTNLPDWYGATLTEQINQCGDEIKGMYILGLNPVVTYPSSNHVKAQLEKLDFLVVQDIFFTETCQYADVILPGACFAEKDGTFTSGERRINRVRKAVNPPGQAKEDIHIISELAAKMGFKGFELPTAKDVWDDMRAVTPSMFGATYEKLERPEGICWPCPTEEHPGTPILHREKFATADGKGNLFGIDYRPPAEVADAEYPFTLMTGRLIFHYHSRTQTDRAADLHREVPESYAQINIEDARRLGIKNNEYIKLKSRRGETTTLARVTDEVAPGVVYMTMHFADGVNNLTNTVLDPMSKMPELKHCAISIEKVGGN |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-01-15 Deposition Author(s): Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.