7BKB
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure)
PDB DOI: 10.2210/pdb7bkb/pdb
Classification: OXIDOREDUCTASE Organism(s): Methanospirillum Hungatei Jf-1
Deposited: 2021-01-15 Deposition Author(s): Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.5 Å
Formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (hexameric, composite structure)
Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.
Primary Citation of Related Structures: 7BKB
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CoB--CoM heterodisulfide reductase iron-sulfur subunit A | A | 671 | Methanospirillum Hungatei Jf-1 | MAENTEPRIGVFVCHCGTNIAGSMSIDDVVNYAKTLPYVAVADQYQYMCSTPGQKKIDDAIKEYNLTGVVVAACSPRLHEPTFRTATKEGGLNPFRFEMANIREQNSWVHMHGMWDEATQKAKDQVRMAVAKAAKLEDLVPKSVPVEKTAMVVGGGVAGMQAALDLASAGIKTYLIERTPTIGGRMSQLDKTFPTLDCSQCILTPKMVDVGRHPNIEMMTYTEVEKVEGYIGNFDVTLRKKARGVLTPTEATAKGIVGGGCNGCGDCSAVCPVIKPNPFEMGMAPRKAIYIYHAQVMPLIYTVDFDSCVKCGLCVEACGDKKAIDLEMQDEFITVKVGTAVLATGYELFPIENKREWGYKQFDNVINALEFERLICASGPTGGHLVRPSDGKTPMKVGFVLCAGSRDNTGIGKPYCSRFCCMYSLKHAHQIMEKIPGAVAYLFYMDIRSFGKMYEEFYYRIQHEGAKFIRGRVANVLEDKETKNLHVFTEDTLLGRPVDVEVDLLVLAAAVQPNEGANELRKKFGVSASQDGWMLEAHPKLNPCGTTTAGVFLAGVCQGPKDIPDTVAQAEGAASAASIPIHMGEVELEPYFAMCIDELCAGCGMCVNLCPYSALSLGEKNGRTVMVVTEAKCKGCGTCGGFCPGGAIKMQHFTTPQIVAQIDAFFAGGEQ |
| Formylmethanofuran dehydrogenase, subunit D | J | 137 | Methanospirillum Hungatei Jf-1 | MKAKKTLNMITQRAVEEGIAMEIGKTSRQYFDACSIIEMNEQDMKELGIMKNTNVRVKSESGEVVVKAVVGRQTCYPGLCHIRQGVWANQVVPPRTQSTGAPQYSGFPVTVEPVPNERLKTALELVQGAVGMWKGDQ |
| Formylmethanofuran dehydrogenase, subunit F | K | 388 | Methanospirillum Hungatei Jf-1 | MSTLFPKYSKTTDGSKVIMEQRLLQQVNNLILDNDICTGCGICSEVCPEEAISVGAVGGVRRGLVDDAASIHVDETKCSYCGVCVIMCPFSALALKVDGEERLPILEKEGFPTYDKGTAIDQDKCVRCNICDDVCPRDAIDRDVPLFEGEDKEGLAKGQAVELKIEFKVDDEKCTKCGICGNLCEAINVLHKPFSPEIGKVEGEVIWDEAYCDGCNVCAEACPSEAIKVTRTVVGQKKLGNVNIIDEDCCTCRWCAINCPTEAITVNKIFEGEITFHAEKCPGGCSTCVDVCPANAIYLPTPKPAKDMKGQIEAKIAVNKDFCILCGACVNACPGEDIIYLRRDSVKIKGKETDLFKKIKEKLFTPRTSKVKEQPSLAGSVELKAVSQ |
| Formylmethanofuran dehydrogenase, subunit B | H | 443 | Methanospirillum Hungatei Jf-1 | MPKVIENVGCPYCGCSCDDVRITVSDDGKDILEVENVCAIGTEIFKHGCSKDRIRLPRMRQPDGSMKDISYEEAIDWTARHLLKAKKPLMYGFGSTNCEGQAAAARVMEIAGGMLDNCATICHGPSFLAIFDNGYPSCTLGEVKNRADVIVYWGSNPAHAHPRHMSRYSIFPRGFFTGKGQKKRTVIVIDPRFTDTANVADYHLQVKQGHDYELFNAFRMVIHGHGKDLPDEVAGIKKETILEVAEIMKNARFGTTFFGMGLTHTDGRNHNIDIAISLTRDLNKISKWTIMAMRGHYNIAGPGVVWSWTFGFPYCLDLTKQNHAHMNPGETSSVDMAMRDEVDMFINIGTDAAAHFPIPAVKQLKKHPWVTIDPSINMASEISDLHIPVCICGVDVGGIVYRMDNVPIQFRKVIEPPEGVMDDETLLNKIADRMEELKAKGEA |
| F420-non-reducing hydrogenase subunit D | F | 140 | Methanospirillum Hungatei Jf-1 | MADDWKPQILAIICNWCSYAGADLAGGARIQYPPTVRAIRVMCTGRVDMLFILKAFVEGADGVLVSGCHFGDCHYLEGNYKAAKRMFMIKNLLRNIGLDDRRFRMTFVSASEGAKWGMVMEDVTNTIKELGPSPIKEFKK |
| Formate dehydrogenase, beta subunit (F420) | E | 414 | Methanospirillum Hungatei Jf-1 | MAAKGDMLYAWAKDAEIQKKGECGGAVTALLKHALETKMVDAVVAIKKGKDLYDAVPTVITNPEDIIQTAGSLHCGTLLIPKLIKKYLNGAKDMKLAVTCKGCDAMAFYELAKRNQINLDNIIMIGVNCGGSVSPVTARKMISNKFGVDPDTVHKEEIDKGQFIIEYEGGHKGIKIDELEEEGYGRRSNCRRCKMKIPRQADIAAGNWGVIGDKAGKATFLEICSEKGANLVNSAQSKGALEISPADPKGIDIRAKVEKAMFNLGDEWRHRDFEGMGKGKDRLKLMMSESSKCIKCYACVEACPICYCIECSTKKPWYIAPGVLPTSFMFHLIRFAHVSDSCINCGQCEELCPMEIPNALFMHSQQVEIEKMFGHIPGQDMTPPIHAFVEEKAERARLDATGTDSIYTNIFTDE |
| CoB--CoM heterodisulfide reductase subunit C | C | 191 | Methanospirillum Hungatei Jf-1 | MAAKSYNIPELDKKLADRRYHLSDTNPEFTQKILKTSRTIANMCYQCGTCTGSCPSAPRSSYRIRLFMRRCVLGLENEALTDPDLWLCTTCYSCTDRCPRDIAPTDVIMAMRNLAFKRDIVPKNFLQTVQLIYNSGHGVPNNDVNRAARTKLGLPADPPTTHSYPEFVKGIQKIIDHYELKENADRILKGD |
| CoB--CoM heterodisulfide reductase subunit B | B | 296 | Methanospirillum Hungatei Jf-1 | MHEYAFFLGCIAPNRYPGCEASAIKTSEKVGIKLLPLKGASCCPAPGAFGSIDLNVWYAMAARNLVLAEEMKKDIALICNGCYKSIWEVNHILKHNDELRDNVNEVLAEIDMQFKGTIDVWHLAELYYDDKVCGVQKIKDSVTTPLSGAKVAAHYGCHLMKPKKERHFGDTENPMWFEELIGALGAEPIQYRNKMQCCGAGGGVRGYDIVHALDITNEKLINIQEAGADAITELCPFCQLQFDRGQIEIKEKFGDVYNIPVLHYNELLGLAQGMSPQDLALDLHAIDCTPFLQKVL |
| Formate dehydrogenase | D | 686 | Methanospirillum Hungatei Jf-1 | MSENSEIMKYVATTCPYCGVGCTLNLVVSNGKVVGVEPNQRSPINEGKLCPKGVTCWEHIHSPDRLTTPLIKKDGKFIEASWDEALDLVAKNLKVIYDKHGPKGLGFQTSCRTVNEDCYIFQKFARVGFKTNNVDNCARICHGPSVAGLSLSFGSGAATNGFEDALNADLILIWGSNAVEAHPLAGRRIAQAKKKGIQIIAVDPRYTMTARLADTYVRFNPSTHIALANSMMYWIIKEGLEDKKFIQDRVNGFEDLKKTVENYADAEAIHGVPLDVVKDIAFRYAKAKNAVIIYCLGITELTTGTDNVRSMGNLALLTGNVGREGVGVNPLRGQNNVQGACDMGAYPNVYSGYQKCEVAENRAKMEKAWSVTNLPDWYGATLTEQINQCGDEIKGMYILGLNPVVTYPSSNHVKAQLEKLDFLVVQDIFFTETCQYADVILPGACFAEKDGTFTSGERRINRVRKAVNPPGQAKEDIHIISELAAKMGFKGFELPTAKDVWDDMRAVTPSMFGATYEKLERPEGICWPCPTEEHPGTPILHREKFATADGKGNLFGIDYRPPAEVADAEYPFTLMTGRLIFHYHSRTQTDRAADLHREVPESYAQINIEDARRLGIKNNEYIKLKSRRGETTTLARVTDEVAPGVVYMTMHFADGVNNLTNTVLDPMSKMPELKHCAISIEKVGGN |
| Formylmethanofuran dehydrogenase | I | 266 | Methanospirillum Hungatei Jf-1 | METITMTLVQEPELFLECYSVTPDLFAGKSLAEIADLPAHEGKIQWKLGDFFKFEGKAGETAADTKIVVNGNVRRMKRFGQQMTAGEIIINSDADMYIGGWMKGGKITVKGNADSFLGIAMEGGEILIEGDAQNHVGSAYRGDWRGMSGGLIRVKGKAGNDIGTAMTGGTIIIEGDAFIHVLTHAEGGTVIIKGDVEGRVGGQMVKGDAYILGNLLYPLPGFKKVATVEKEVDGATYTFDQFIGDLGERKEKKKGEIIYGNIFLKK |
| Formylmethanofuran dehydrogenase, subunit G | L | 146 | Methanospirillum Hungatei Jf-1 | MKYRGPEDKLIVFTFYKESKKKRHFFPFFLQKISYLFQNIYLYFLTTFVQSILIDQAGATNMAFAVHVNMERCTGCNNCVVACPVNALELNTVNPSSTDKIYKVINGDAVILDVKHELCAGCGICVDACPYDVIQLSGQPPQAVEA |
| Formylmethanofuran dehydrogenase, subunit A | G | 571 | Methanospirillum Hungatei Jf-1 | MSELLIKNGYIFDPISGIKGDKADIAIKDGKIVDKVSSKAQVIDASGKTVMSGGVDIHTHVSGPKVNTGRMMRPEDKFFRGSYRGGIIKQGKRMEMGFSIPSTYKTGYAYARMGYTFTNEAAMPPLLAPHVHEEFRDTPILDQAAMPVFGNNWFCFEYIKNKELENNAAYVAWLLNATKGIGIKVVNPGGTEAWAWGENCTTINDPVPYFDITPAEIVKGLIETNEYLGLPHSVHIHGNNLGNPGNYKDTLDTLRLAESYKAKNKFGREQVLHNTHIQFHSYKGTSWADFESGAKEIMDYVNANKNITCDIGQVTLDETTTMTADGPFEYHLNQLNHIKWANVDVELETGSGVVPYIYDKNIKVCGIQWAIGLELALYAKDLMRVHITTDHPNAGPFTRYPCVIKWLMSEKARKATLDTMKWKDKVIAASNIASMDRELGLYEIAMMTRAGPAKALGLAAIYGSLVKGADGNVAIYNLDANDLPSDPELIEAAFQNTAYTIKEGVVVVKDGEIIAEPHKYTLWTKVNMPENAQVMHDIKEKFTKNYTVNLENYAVFDEHVHNPRAIELDVA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2021-01-15 Deposition Author(s): Murphy, B.J. , Pfeil-Gardiner, O. , Shima, S. , Watanabe, T.