7B9F
Structure of the mycobacterial esx-5 type vii secretion system hexameric pore complex
PDB DOI: 10.2210/pdb7b9f/pdb
Classification: TRANSPORT PROTEIN Organism(s): Mycobacterium Xenopi Rivm700367
Deposited: 2020-12-14 Deposition Author(s): Beckham, K.S.H. , Chojnowski, G. , Kosinski, J. , Mortensen, S.A. , Mullapudi, E. , Rettel, M. , Ritter, C. , Savitski, M.M. , Wilmanns, M. , Ziemianowicz, D.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.0 Å
Structure of the mycobacterial esx-5 type vii secretion system hexameric pore complex
Beckham, K.S.H. , Chojnowski, G. , Kosinski, J. , Mortensen, S.A. , Mullapudi, E. , Rettel, M. , Ritter, C. , Savitski, M.M. , Wilmanns, M. , Ziemianowicz, D.
Primary Citation of Related Structures: 7B9F
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| EccE5 | E | 400 | Mycobacterium Xenopi Rivm700367 | MRAQRRFGLDLSWPRLTGVFLIDVAVLALVSHLPDAWQANHIAWWTGVGVAVLVTIVAVVTYRRTPLACALVARVLDRFVDPEMTLTEGCTPALDHQRRFGHDVVGIREYQGQLVAVVTVEGHEEAPSGRHRNRDAAPAWLPVEAVAARLRQFDVRLDAIDIVSVGTRRTSGRDDVSDVGVDDTGPVDARQPLDEHHTWLVLRMDPQRNVAAVAARDSVAATLAAATERLAHDLNGRRWTARPLTSSEIDDMDATVLAGLQPAHVRPRRRRLKYKQPEGYKEFVTSFWVSPRDITSETLERLWLPDTEATAVTVRLRPRHGGVEVSAWVRYHSSRRLRRSVWGGLNRLTGRQLDAVCASMPVPTRRPRLVVPARELHDGEELAVLVGQAPAPSPSPAAAR |
| EccD5 | X | 502 | Mycobacterium Xenopi Rivm700367 | MTAIVEAPQPGAEAIASPQAAVVAIMAADVQIAVVLDAHAPISVMIDPLLKVVNTRLRELGVAPLEAKGRGRWMLCLVDGTPLRPNLSLTEQEVYDGDRLWLKFLEDTEHRSEVIEHISTAVATNLSKRFAPIDPVVAVQVGATMVAVGVLLGSALLGWWRWQHESWLPAPFAAVIAVLVLTVATMILARSKTVPDRRVGDILLLSGLVPLAVAIAATAPGPVGAPHAVLGFGVFGVAAMLVMRFTGRRLGVYTALVTLCAAATAAGLARMVLLTSAVTLLTCVLLACVLMYHGAPALSRWLSGIRLPVFPSATSRWVFEARPDLPTTVVVSGGGQPTLEGPASVRDVLLRAERARSFLTGLLVGLGVLTVVCLAGLCDPHAGRRWLPLLLAAFTFGFLILRGRSYVDRWQAITLAATAVLIIAAVAVRYVLVSGSPAVLSAGVAVLVLLPAAGLTAAAVVPNTIYSPLFRKIVEWIEYLCLMPIFPLALWLMNVYEAIRYR |
| EccD5 | D | 502 | Mycobacterium Xenopi Rivm700367 | MTAIVEAPQPGAEAIASPQAAVVAIMAADVQIAVVLDAHAPISVMIDPLLKVVNTRLRELGVAPLEAKGRGRWMLCLVDGTPLRPNLSLTEQEVYDGDRLWLKFLEDTEHRSEVIEHISTAVATNLSKRFAPIDPVVAVQVGATMVAVGVLLGSALLGWWRWQHESWLPAPFAAVIAVLVLTVATMILARSKTVPDRRVGDILLLSGLVPLAVAIAATAPGPVGAPHAVLGFGVFGVAAMLVMRFTGRRLGVYTALVTLCAAATAAGLARMVLLTSAVTLLTCVLLACVLMYHGAPALSRWLSGIRLPVFPSATSRWVFEARPDLPTTVVVSGGGQPTLEGPASVRDVLLRAERARSFLTGLLVGLGVLTVVCLAGLCDPHAGRRWLPLLLAAFTFGFLILRGRSYVDRWQAITLAATAVLIIAAVAVRYVLVSGSPAVLSAGVAVLVLLPAAGLTAAAVVPNTIYSPLFRKIVEWIEYLCLMPIFPLALWLMNVYEAIRYR |
| EccC5 | C | 1392 | Mycobacterium Xenopi Rivm700367 | MKQGFARPTPERAPVVKPENIVLPTPLSVPPPEGKPWWLVVVGVLVVGLLVGMVGMTVASGSRLFLGAGAIFPIFMIGGVAMMMFGGRFGGQQQMSRPKLDAMRAQFMLMLDMLRETAQESADSMDANYRWFHPAPTTLAAAVGSSRMWERQPDGKDLNFGVVRVGVGMTRPEVTWGEPQNMPTDIELEPVTGKALQEFGRYQSVVYNLPKMVSLLVEPWYSLVGEREQVLGLTRAIICQLAFSHGPDHVQMIVVTSDPDRWDWVKWIPHFGDPRRRDAAGNARMVYTSVREFATEQAELFAGRGSFTPRHASSSAETPTPHHVIISDIEDPQWEYVISSEGVDGVTFFDLTGSPLWTGAPQRVLRFTDSAGVIETLPRDRDTWMVIDDNAWFFALADQMSEADAEQFAHQMAHWRLAEAYEEIGQRVVQLGARDILSYYGIDDAGEIDFNTLWSGSGRRDLLSRSRLRIPFGNRADNGELLFLDMKSLDEGGDGPHGVMSGTTGSGKSSLVRTVIASLMLAHPPEELQFVLADLKGGSAVKPFDGVPHVSRIITDLEDDQALMERFLEAMWGEIARRKEICFSAGVDGAKEYNELRARMKARGEDMPPLPMLVVVIDEFYEWFRIMPTAVDVLDSIGRQGRAYWVHLMMASQTIESRAEKLMENMGYRLVLKAQTAGAAQAAGVPNAVNLPSQAGLGYFRKSGDEIIRFQAEYLWRDYRRGSSYDGEEQAPLTHSVDYIRPQLFTTAFAPLEVSVSGPDGQSALPQVVDGEAVNGHRGGDDVDEEEEALRTPKVGTVIIDQLRQIDFEPYRLWHPPLDVPVPIDELVNRFLGRPWQQDYGTAKNLVFPIGIIDRPYKHDQPPWTVDTSGAGANVLILGAGGAGKTTALQTLICAAALTHTPEQVQFYCLAYSGTALTTVANLPHVGGVSGPTDPYGVRRTVAEVLGLVRDRKRSFLEYDVPSMEVFRRRKFGGEPGGVPDDGFGDVYLVIDNYRALAEENEVLIEQVNQIINQGPSFGVHVVATADRESELRPPVRSGFGSRVELRLAAVEDAKLVRSRFAKDVPPKPGRGMVAVNYVRLDSDPQAGLHTLVARPALGSTPDAVFESDSVAAAVRQVAAGEARPVRRLPARFGLDQLRQVAAADRRQGVGAGGIAWAISELDLQPVYLNFADNAHLMVTGRRECGRTTTLATIMSEIGRIYAPGASTAPPTSRPSAQVWLVDPRRQLLTVLGSDYVEKFAYNLDGVAAMMDDLAAALARREPPPGLSAEELLSRSWWSGPEIFLIIDDIQQLPPGFDSPLHKAAPWVTRAADVGLHVFVTRTFGGWSSAGSDPILRALHQANAPLLVMDADPDEGFIRGKMKGGPLPRGRGLLMAEDTGVFVQVAATDLRR |
| EccB5 | B | 506 | Mycobacterium Xenopi Rivm700367 | MPSEQRGQHRSGYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQVLAVVASVSAAGVICLGALLWSFISPSGQMGESPIIADRDSGALYVRVGDTLYPALNLASARLIAGRAENPHKVRSSQIAEQPHGPMVGIPGAPSDISPTSPASSSWLVCDAVTAAQGVGAPASVTVTVIDGTPDLSGRRHVLSGSDAVVLRYGNDTWVIRQGRRSRIDAANRAVLLPLGLTPEQVKQASPMSRALYDALPVGPELAVPKVPDAGKPANFPGAPAPVGAVLVTPQISGPQQYSVVLPDGVQTISPIVAQILQNAGTPAGSMPVVVAPATLARMPVVHGLDLSAYPDSPLNVVNMKENPATCWWWEKTAGEERARTQVVSGPTVPIATSDTNKVVSLVKADNTGREADRVYYGPNYANFVVVTGNDPAASTAESLWLLSKSGVRFGVDNSREARTALGLTSTPSPAPWVALRLLAPGPMLSRADALVRHDTLPTDTNPAELAVPK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-12-14 Deposition Author(s): Beckham, K.S.H. , Chojnowski, G. , Kosinski, J. , Mortensen, S.A. , Mullapudi, E. , Rettel, M. , Ritter, C. , Savitski, M.M. , Wilmanns, M. , Ziemianowicz, D.