7ARD
Cryo-em structure of polytomella complex-i (complete composition)
PDB DOI: 10.2210/pdb7ard/pdb
Classification: ELECTRON TRANSPORT Organism(s): Polytomella Sp. Pringsheim 198.80
Deposited: 2020-10-23 Deposition Author(s): Klusch, N. , Kuehlbrandt, W. , Yildiz, O.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.11 Å
Cryo-em structure of polytomella complex-i (complete composition)
Klusch, N. , Kuehlbrandt, W. , Yildiz, O.
Primary Citation of Related Structures: 7ARD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MWFE | A | 71 | Polytomella Sp. Pringsheim 198.80 | MGWYALPSYVIVSAAWAAGFWAIDTYQIYKEGKPSWNQNKDQFQRALYRRDWYLRREQETIGMFLGFDYGA |
| AGGG | J | 87 | Polytomella Sp. Pringsheim 198.80 | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| B12 | K | 55 | Polytomella Sp. Pringsheim 198.80 | MSSKIGFQWEKYEAWRYHPLLRFNKNTMFPGVGLGAAAFAVYYVVDTLSGDKSHH |
| ASHI | L | 151 | Polytomella Sp. Pringsheim 198.80 | MSLTLGLRSLSRGALAARNALPKRAGAGGPVKLSPPVDKPLPYNYDFWMDNGIYPGQPIYDGMFGSMVGNMSLEYMAKGWLVLLPILSAPFVYEHCIADDVTRNPFVPRQYPSEVREFLALFKNGFVLNDYSQPDYEEMKRRQSGLLTPIY |
| B15 | M | 138 | Polytomella Sp. Pringsheim 198.80 | MSALQAVKNLTTRMRPFAFQQIRKASNSSRIAGDTTGKYTPNIFSPETPMDRSFSHVPKNPFWEAWVFRRDNIQREFVWTWQTIFDLATFVGGLYVAMYATASFCSRQNDKRNGYPERNYYFSDSKSNFVIPDEREFY |
| Complex I-B22 | N | 121 | Polytomella Sp. Pringsheim 198.80 | MASEAVLRLPHKLRVMRMYRTGLKEIVNWSYGRHEFYPRANALRMEFEANKELSDREQIRKLVLHGEDLLARFRHWEPTIRSEFVGGTVYGVWPQHCKDVKFVPNPAYIDEFKQGDTVLLY |
| B18 | O | 85 | Polytomella Sp. Pringsheim 198.80 | MADRFPPPKMVATQEEMDNADIPYKYRDYCAHLIIDFKECRYGHPLTWRINCAHELHHYNKCSYIEFKRRVAIAIEEKKRRGLMV |
| PDSW | P | 156 | Polytomella Sp. Pringsheim 198.80 | MTTATIEERRAFHKEVLDIVQSKLANKNSEWARPEEPILHNLKSEKEEPHVYYHNNNFRVTRQLIHFEKTKIFEDELDKCMRTHGEAKYRKCQEIAKRFQASCRVASNLERGPNARKRDVGFIYQNNKLRELEKDAKELGLNNPFPPSSPRTTIGY |
| B17.2 | Q | 155 | Polytomella Sp. Pringsheim 198.80 | MSLTKYLNNLVSTSGKKSLAGFFVSWEFAKMIVDGNLHNNVVRPQSGAQVGIDKFGNKYFEDNEESYGRRRWIVFADKFDYKISSIPPEWHGWLNYINDYKPSDYETIDNKKPMYHAEWTISATGTQECYNPKGSWFNPAKRNWKKVEIWQPPQV |
| B14.5a | R | 121 | Polytomella Sp. Pringsheim 198.80 | MSGILKTVQSIFYSVGLKEPWKMTGIRSLPDFEYYLPFGLTYRGISPGNQPIKAVVPHDVPKLVYDIKYFARDYRRNNSYTVRSVDSKTPFDYSKVFGSAPLKPADVKTVRIPEVMPHRGC |
| NUOP7 | S | 118 | Polytomella Sp. Pringsheim 198.80 | MVKTLADYIHWRNKPSSIPPVDEYRPPVPLVNYDKLSTQFFSKLDNDPVINRVLRAPKVTVMATSLPIVNHPAFLFVAGALTGFSLTYAITSHYVGRKEIENLVKFDPRYFPEYTKSS |
| B9 | B | 54 | Polytomella Sp. Pringsheim 198.80 | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| NUOP8 | T | 134 | Polytomella Sp. Pringsheim 198.80 | MRSALRLANATRLSTFRLTSAPAVRLASPSFFVQKEDEENTRSIHTSNSSFHDEPKHQIPGNALDNWAFLRTYAKPLPDMIHYYYYVYLFGFFFVYKVADFPEYSPRVLVMAALIGSLFYVRRDWVHREFKDSP |
| unknown | U | 50 | Polytomella Sp. Pringsheim 198.80 | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| B13 | V | 159 | Polytomella Sp. Pringsheim 198.80 | MIRNISSRFSTCLRQALPSASSNRTFKAVADVEIDFSNRAVLKKYVGVDHLSKEQGTKAKFIVSLNSLLEAVKSVPETAEYRKAIEATCQYRLKVCGENNSDAAIEEVLDAHLEELIAESKEELRILPVLLESKPWDVPADYSAPVFDYVDASTILDKK |
| unknown | W | 41 | Polytomella Sp. Pringsheim 198.80 | XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX |
| CAL | X | 280 | Polytomella Sp. Pringsheim 198.80 | MLRRGAKELVQLLRTPVKQGAQLQYVATRNVNFYDAPNGPAVEQVKIEDEWYNRQRTEFNILNKQPSKADDVFIAPNAVVCGDVDLYQKVSIFFGAVVRGDLNTIRIGENSTILDKAVVHAASTSPTGLNAATIIGSNVTVEPHAVLRSCRIGDNCIVGARSVVCEGAIMHPESVLAPGSVLAPGRQIPSGELWAGSPAKFVRKLTYYETSNVIRESAEHYYDIATGFRNETFDHGSAWRDAEAYRQKLVDYKEYNWVNYREQKYVMRLQRDAAELEKLL |
| CA2 | Y | 310 | Polytomella Sp. Pringsheim 198.80 | MSLLKNYPPSYLYPFRHPKPEGVIEKVLFNLGSLFRSAGQGMDELGSLMLGNGGMQESVGPNLAYAPVKYNPAAAPKAGIVAPIPASAQRVLGVKEIVLPSKAESTFIAPNANVLGDVKIGAKSSIWYGAVLRGDVNSIEIGDNTNVQDNVTIHVAKHSIDGKLRNTVIGNNVTIGHCATIHACTIADNVIIGMGATVLDGVKVESGSIVGAGSIVPPNTVIPAGQVWVGNPAKFIRNVLPEENGFIASSANNYDLLGQQHKFENSKVFEEMLVEEEIAKDRELLEDKNLAVHQLYIFDPQTQLAARPRR |
| CA3 | Z | 227 | Polytomella Sp. Pringsheim 198.80 | MASFLKTIVWRCGFAIKETGLALETLGCKLQGNYSFREKCSRHTPLTQYQFKAPSVGESTFVAPSALVSGDVIIGEKSSVLYNAVVRGEFKSVTIGEGSTISDNAYVGSSSEFSPETVIGSNVSVGSGAVLKGCTVGNNVLIGNNVIISEKATVEDNTILAPGSYVPEDVVVKSGELWSGSPAQKLRNLDEKELALFNTLSVGATELAADHAVIMKLLELKQKEFIK |
| ND9 | C | 217 | Polytomella Sp. Pringsheim 198.80 | MSYCYARKMTDKDYIAYDNIKNFGDNYLTDYIIKTVPKYVTMAVNGPAQSSVLYQEPTIYTTPEHIYALCAFLRDHVNLQYKTLIDITAVDYPERSARFEVVYHLLSPRLNNRIRIKVVVDEVTSVPSVSRIWNAANWFERETWDMFGVFFSNHPDLRRVLTDYGFTGHPLRKDFPLTGYTEVRYDYGKKRVISEPLELTQEFRYFDFSSPWDTLSR |
| ND7 | D | 395 | Polytomella Sp. Pringsheim 198.80 | MKPLTPSKVSNFTINFGPQHPAAHGVLRLVLEMDGEIIKRADPHIGLLHRGTEKLLEYKTYNQGIPYFDRLDYVSMMCMEHSYVLAIEQLLNVAVPLRGQYIRVLFSEITRIMNHILAITCHSMDVGALTPFLWAFEEREKLFEFYERVSGARMHAAYFRVGGVAQDLPIGLLRDIYDWSRQFASRVDEMEELLTGNRIWKERTIDVGLVTAQQAWDWGCSGPILRGSGIDWDLRKNQPYDVYGRMDFNVPIAGHGDCYDRYLVRVQEMRESLRIIYQCLNEMPDGLYKTPDQKVSPPSRGQMKQSMESLIHHFKLFSEGYHVPAGETYRAVEAPKGEFGVYLVSRGGNRPYRCKIRSPGYAHLQMLDMVAKGAMLADVVTIIGTLDVVFGEIDR |
| 24 kDa | E | 276 | Polytomella Sp. Pringsheim 198.80 | MFSRFTSLVVRAAVVASSHNKAATPIISVTLPSLRSFATNSTDVFNVHHDTPENNKDTKFDFTEANYKLVNKIMSNYPSNYKASAMIPLLDLAQQQNGGVVSLAVMNRVAQILEVPPIKVYEVATFFTMFNRSKMGKYHVCICGTTPCRLQGAQKIEEAITKHLGVGIGQTTADGTFTLGEMECMGACVNAPMIAVADYRNGVEGFSYNYYEDLTPQDAVNILEKLKKGEKPKLGSQHRQTAEPAGAVVGDKWIPSSGEQTLMGELPGPYCRDLSK |
| 51 kDa | F | 469 | Polytomella Sp. Pringsheim 198.80 | MQRSTGAALRFAGFRSRCLSLLRTFSTQAPPAAAPEKTTFGGLRDQDRIFTNIYGRHDPYIKGAEARGDWYMTKDLVGKGRDWIIDQIKKSGLRGRGGAGFASGLKWSFMPKVSDGRPSYLVVNGDESEPGTCKDREIMRHEPHKLVEGCLVAGTAMGARAGYIYIRGEFVNERKAVERAVAEAYAKGYLGKNACGSGVDFDLFVHYGAGAYICGEETALIESLEGKQGKPRLKPPFPAGMGLYGCPTTVTNVETVAVSPTILRRGPEWFSSFGRKNNAGTKLFAISGHVNRPVTVEEEMSIPLRELIERHAGGVRGGWDNLLAIIPGGSSVPLLPKKMCDDVIMDFDALRTAQSGLGTAAVIVMNKDTDVIDAIARLSYFYKHESCGQCTPCREGTGWLYDIMSRMRKGDARLEEIDMLWEITKQIEGHTICALGDAAAWPVQGLIRHFRSEMEDRIKNADQQRISAH |
| 75 kDa | G | 720 | Polytomella Sp. Pringsheim 198.80 | MISKKAIQAISQLGAKQPAVRAISSSVSALNQAAAAPALPADKMEVFVNGEAVVVPKNFTVLQACDAAGVDVPRFCYHQRLSIAGNCRMCLVEIEKAPKPVASCAFPAGPGMKIKTDTPVIKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMIFGSDRSRFIEYKRAVADKNLGPLIKTSMNRCIHCTRCVRFTHEVAGTSELGITGRGRDSEVGTYIEKLHSSELSGNVIDLCPVGALLSKPYAFTARSWELKGTETIDVSDALGSNIKVDCRGTEVMRITPRLNDAINEEWLSDKGRFQYDGLKRQRLNTPLVKGAKGLENATWSAAFDAIRTAIAGAKGNELKAIAGKLADAESMIALKDLFNKLGSGNLIHEDGSATLSADVRSSYIANTTIASIEKADVILLVGTNPRFESPVFNARLRKVFLDGAKVGLVGEKVDLTYAYQHLGADVAALESLASGKGAFFEALKGAKNPVVIVGSSVLRRDDREAVLKTVNDLVDAAGVVKEGWNGFNVLHDNASRVAALDIGFVPSASARTNPVPAKVVYLLGSDDFKDEEIPADAFVIYQGHHGDKGAARANVVLPGAAYTEKASLFANTEGRVQTTRTAVPVLGDAREDWKIIRALSEVVGQQLPYDSQPQVRARLAEVAPHFAEIGKAESALWLNGQYFKGVKDLVAKAARSTASLATNISNYYMTDAISRASRTMAKCTAVRQQ |
| ND1 | H | 293 | Polytomella Sp. Pringsheim 198.80 | MNLNIIMTVLPLLVSVAFLTLSERAVMGSLQRRMGPAVSGAFGILQPFWDGFKLAVKEPILPANAAAGIFYAAPLICICICVASWCTLLLTDLSIGGLFLLLLSSLAVYGVLLAGYSCNSKYAFLGCLRSVSLMISYELVISVVILCVILETRDGNGFPCLNLTETASQTKIILIPAGLLFYICSLAESKRVPFDLPEAEAELVAGYNVEYSSLGFAVFFVAEYGNTLLMAALINIYFLGKLNSALIAAIFVSFIWVRGTLPRYRYDMFMQIGWKSLLPVALALYLAQASLGY |
| TYKY | I | 229 | Polytomella Sp. Pringsheim 198.80 | MSLINRAAQRLLSMPSVSSMGGLTQFTRSMGTERRPGQSGAWKQVDKQRYSSEWEQDPTFKQVPKNVSEVLDDSVSVLFLTDIVRGMMYSASGFFDDKVTILYPFEKGAVSPRFRGEHALRRYPTGEERCISCKLCEAICPAQAITIEAEEREDGSRKTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETREELLYDKQKLLENGDKWEQEIAANLRTESLYR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-10-23 Deposition Author(s): Klusch, N. , Kuehlbrandt, W. , Yildiz, O.