Crystal structure of dengue 3 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10
PDB DOI: 10.2210/pdb7a3p/pdb
Classification: VIRAL PROTEIN Organism(s): Dengue Virus 3 , Homo Sapiens
Deposited: 2020-08-18 Deposition Author(s): Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.
Crystal structure of dengue 3 virus envelope glycoprotein in complex with the scfv fragment of the broadly neutralizing human antibody ede1 c10
Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.
Primary Citation of Related Structures: 7A3P
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Envelope protein E | A | 428 | Dengue Virus 3 , Homo Sapiens | MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLCIEGKITNITTDSRCPTQGEAILPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQCLESIEGKVVQHENLKYTVIITVHTGDQHQVGNETQGVTAEITPQASTVEAILPEYGTLGLECSPRTGLDFNEMILLTMKNKAWMVHRQWFFDLPLPWTSGATTETPTWNRKELLVTFKNAHAKKQEVVVLGSQEGAMHTALTGATEIQNSGGTSIFAGHLKCRLKMDKLELKGMSYAMCLNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGESNIVIGIGDKALKINWYKKGLVPRGSSAWSHPQFEKGGSGGGSGGSAWSHPQFEK |
Envelope protein E | B | 428 | Dengue Virus 3 , Homo Sapiens | MRCVGVGNRDFVEGLSGATWVDVVLEHGGCVTTMAKNKPTLDIELQKTEATQLATLRKLCIEGKITNITTDSRCPTQGEAILPEEQDQNYVCKHTYVDRGWGNGCGLFGKGSLVTCAKFQCLESIEGKVVQHENLKYTVIITVHTGDQHQVGNETQGVTAEITPQASTVEAILPEYGTLGLECSPRTGLDFNEMILLTMKNKAWMVHRQWFFDLPLPWTSGATTETPTWNRKELLVTFKNAHAKKQEVVVLGSQEGAMHTALTGATEIQNSGGTSIFAGHLKCRLKMDKLELKGMSYAMCLNTFVLKKEVSETQHGTILIKVEYKGEDAPCKIPFSTEDGQGKAHNGRLITANPVVTKKEEPVNIEAEPPFGESNIVIGIGDKALKINWYKKGLVPRGSSAWSHPQFEKGGSGGGSGGSAWSHPQFEK |
Single Chain Variable Fragment | H | 144 | Dengue Virus 3 , Homo Sapiens | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG |
Single Chain Variable Fragment | I | 144 | Dengue Virus 3 , Homo Sapiens | MAEVQLVESGAEVKKPGASVKVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAIYYCARDKVDDYGDYWFPTLWYFDYWGQGTLVTVSSGTGGSGGGGSGGGG |
Single Chain Variable Fragment | L | 154 | Dengue Virus 3 , Homo Sapiens | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
Single Chain Variable Fragment | M | 154 | Dengue Virus 3 , Homo Sapiens | SGGGASQSALTQPASVSGSPGQSITISCTGTSSDVGGFNYVSWFQQHPGKAPKLMLYDVTSRPSGVSSRFSGSKSGNTASLTISGLQAEDEADYYCSSHTSRGTWVFGGGTKLTVLAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
Method: X-RAY DIFFRACTION
Deposited Date: 2020-08-18 Deposition Author(s): Duquerroy, S. , Guardado-Calvo, P. , Rey, F.A. , Rouvinski, A. , Sharma, A. , Vaney, M.C.