6ZPL
Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody sb_glyt1#7 and bound na and cl ions.
PDB DOI: 10.2210/pdb6zpl/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified
Deposited: 2020-07-08 Deposition Author(s): Bourenkov, G. , Dawson, R.J.P. , Guba, W. , Nissen, P. , Pinard, E. , Schneider, T.R. , Seeger, M.A. , Shahsavar, A. , Siegrist, M. , Sinning, S. , Stohler, P. , Zimmermann, I.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.945 Å
Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody sb_glyt1#7 and bound na and cl ions.
Bourenkov, G. , Dawson, R.J.P. , Guba, W. , Nissen, P. , Pinard, E. , Schneider, T.R. , Seeger, M.A. , Shahsavar, A. , Siegrist, M. , Sinning, S. , Stohler, P. , Zimmermann, I.
Primary Citation of Related Structures: 6ZPL
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Sodium- and chloride-dependent glycine transporter 1 | B | 576 | Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified | TKRDQNLKRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCGIPAFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTHDCAGVLDASNLTHSLQRTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLGCLGVAWLVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFDGIMYYLTPQWDKILEAKVWGDAASQAFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAMFRLARTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTIAPSPEDGFEVQPLH |
| Sodium- and chloride-dependent glycine transporter 1 | A | 576 | Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified | TKRDQNLKRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCGIPAFFMELSFGQFASQGCLGVWRISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTHDCAGVLDASNLTHSLQRTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLGCLGVAWLVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFDGIMYYLTPQWDKILEAKVWGDAASQAFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMANHLGVDVSRVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDEVGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVAIMYIYGHRNYFQDIQMMLGFPPPLFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAMFRLARTDGDTLLQRLKNATKPSRDWGPALLEHRTGRYAPTIAPSPEDGFEVQPLH |
| Endoglucanase H | C | 273 | Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified | LKIGAWVGTQPSESAIKSFQELQGRKLDIVHQFINWSTDFSWVRPYADAVYNNGSILMITWEPWEYNTVDIKNGKADAYITRMAQDMKAYGKEIWLRPLHAANGDWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQSWGSQWQSFDQVFSRAYQALASINKPIIIAEFASAEIGGNKARWITEAYNSIRTSYNKVIAAVWFHENKETDWRINSSPEALAAYREAIG |
| Sybody Sb_GlyT1#7 | E | 120 | Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified | QVQLVESGGGLVQAGGSLRLSCAASGFPVYAYEMYWYRQAPGKEREWVAAISSSGTWAGYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDWGASWAYYDYWGQGTQVTVS |
| Sybody Sb_GlyT1#7 | F | 120 | Homo Sapiens , Hungateiclostridium Thermocellum (Strain Atcc 27405 / Dsm 1237 / Jcm 9322 / Nbrc 103400 / Ncimb 10682 / Nrrl B-4536 / Vpi 7372) , Unidentified | QVQLVESGGGLVQAGGSLRLSCAASGFPVYAYEMYWYRQAPGKEREWVAAISSSGTWAGYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDWGASWAYYDYWGQGTQVTVS |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-07-08 Deposition Author(s): Bourenkov, G. , Dawson, R.J.P. , Guba, W. , Nissen, P. , Pinard, E. , Schneider, T.R. , Seeger, M.A. , Shahsavar, A. , Siegrist, M. , Sinning, S. , Stohler, P. , Zimmermann, I.