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FASTA Sequence PDB Format mmCIF Format
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6ZCZ

Crystal structure of receptor binding domain of sars-cov-2 spike glycoprotein in ternary complex with ey6a fab and a nanobody.

PDB DOI: 10.2210/pdb6zcz/pdb

Classification: VIRAL PROTEIN
Organism(s): Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus

Deposited: 2020-06-12
Deposition Author(s): Fry, E.E. , Ren, J. , Stuart, D.I. , Zhao, Y. , Zhou, D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.65 Å

6zcz
Literature

Crystal structure of receptor binding domain of sars-cov-2 spike glycoprotein in ternary complex with ey6a fab and a nanobody.

Fry, E.E. , Ren, J. , Stuart, D.I. , Zhao, Y. , Zhou, D.

Primary Citation of Related Structures: 6ZCZ


Proteins
Molecule Chains Sequence Length Organism Sequence
Spike protein S1 E 205 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus ETGHHHHHHTNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGKK
Nanobody F 151 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAQTHYVSYLLSDYATWPYDYWGQGTQVTVSSGPGGQHHHHHHGAEQKLISEEDLS
EY6A heavy chain H 226 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EY6A light chain L 215 Salmonella Enterica , Klebsiella Phage Phiko2 , Gammaretrovirus DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-06-12
Deposition Author(s): Fry, E.E. , Ren, J. , Stuart, D.I. , Zhao, Y. , Zhou, D.