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6YOR
Structure of the sars-cov-2 spike s1 protein in complex with cr3022 fab
PDB DOI: 10.2210/pdb6yor/pdb
Classification: VIRAL PROTEIN Organism(s): Salmonella Enterica , Gammaretrovirus
Deposited: 2020-04-15 Deposition Author(s): Carrique, L. , Duyvesteyn, H.M.E. , Fry, E.E. , Huo, J. , Malinauskas, T. , Owens, R. , Ren, J. , Ruza, R.R. , Shah, P.N.M. , Stuart, D.I. , Zhao, Y. , Zhou, D.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.9 Å
Structure of the sars-cov-2 spike s1 protein in complex with cr3022 fab
Carrique, L. , Duyvesteyn, H.M.E. , Fry, E.E. , Huo, J. , Malinauskas, T. , Owens, R. , Ren, J. , Ruza, R.R. , Shah, P.N.M. , Stuart, D.I. , Zhao, Y. , Zhou, D.
Primary Citation of Related Structures: 6YOR
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | E | 203 | Salmonella Enterica , Gammaretrovirus | PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTN |
| Spike glycoprotein | A | 203 | Salmonella Enterica , Gammaretrovirus | PNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTN |
| IgG H chain | H | 229 | Salmonella Enterica , Gammaretrovirus | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH |
| IgG H chain | B | 229 | Salmonella Enterica , Gammaretrovirus | TQMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH |
| IgG L chain | L | 220 | Salmonella Enterica , Gammaretrovirus | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| IgG L chain | C | 220 | Salmonella Enterica , Gammaretrovirus | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-04-15 Deposition Author(s): Carrique, L. , Duyvesteyn, H.M.E. , Fry, E.E. , Huo, J. , Malinauskas, T. , Owens, R. , Ren, J. , Ruza, R.R. , Shah, P.N.M. , Stuart, D.I. , Zhao, Y. , Zhou, D.