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6YMX
Ciii2/civ respiratory supercomplex from saccharomyces cerevisiae
PDB DOI: 10.2210/pdb6ymx/pdb
Classification: ELECTRON TRANSPORT Organism(s): Pseudomonas Chlororaphis Subsp. Piscium
Deposited: 2020-04-10 Deposition Author(s): Berndtsson, J. , Ott, M. , Rathore, S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.17 Å
Ciii2/civ respiratory supercomplex from saccharomyces cerevisiae
Berndtsson, J. , Ott, M. , Rathore, S.
Primary Citation of Related Structures: 6YMX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cytochrome b-c1 complex subunit 1, mitochondrial | A | 431 | Pseudomonas Chlororaphis Subsp. Piscium | AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW |
| Cytochrome c oxidase subunit 12, mitochondrial | J | 78 | Pseudomonas Chlororaphis Subsp. Piscium | NSPLHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDINSD |
| Cytochrome c oxidase subunit 13, mitochondrial | K | 114 | Pseudomonas Chlororaphis Subsp. Piscium | NALKPAFGPPDKVAAQKFKESLMATEKHAKDTSNMWVKISVWVALPAIALTAVNTYFVEKEHAEHREHLKHVPDSEWPRDYEFMNIRSKPFFWGDGDKTLFWNPVVNRHIEHDD |
| Cytochrome b-c1 complex subunit 2, mitochondrial | M | 352 | Pseudomonas Chlororaphis Subsp. Piscium | LTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL |
| Cytochrome b-c1 complex subunit 1, mitochondrial | L | 431 | Pseudomonas Chlororaphis Subsp. Piscium | AEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNIFLSKENSAVAAKEGLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKSVLKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNSNAVVVGTGNIKHEDLVNSIESKNLSLQTGTKPVLKKKAAFLGSEVRLRDDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIEGLLDYMRIRSDMSMMRW |
| Cytochrome c oxidase subunit 2 | B | 236 | Pseudomonas Chlororaphis Subsp. Piscium | DVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIVMTYSKNPIAYKYIKHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDEVISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDATPGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIEAVSLPKFLEWLNEQ |
| Cytochrome c oxidase subunit 3 | C | 268 | Pseudomonas Chlororaphis Subsp. Piscium | THLERSRHQQHPFHMVMPSPWPIVVSFALLSLALSTALTMHGYIGNMNMVYLALFVLLTSSILWFRDIVAEATYLGDHTMAVRKGINLGFLMFVLSEVLIFAGLFWAYFHSAMSPDVTLGACWPPVGIEAVQPTELPLLNTIILLSSGATVTYSHHALIAGNRNKALSGLLITFWLIVIFVTCQYIEYTNAAFTISDGVYGSVFYAGTGLHFLHMVMLAAMLGVNYWRMRNYHLTAGHHVGYETTIIYTHVLDVIWLFLYVVFYWWGV |
| Cytochrome b | N | 385 | Pseudomonas Chlororaphis Subsp. Piscium | MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVIIFILTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYFAYFLIIVPVISTIENVLFYIGRVNK |
| Cytochrome c oxidase subunit 4, mitochondrial | D | 117 | Pseudomonas Chlororaphis Subsp. Piscium | VVKTAQNLAEVNGPETLIGPGAKEGTVPTDLDQETGLARLELLGKLEGIDVFDTKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPAGSHTIMWLKPTVNEVARCWECGSVYKLNPV |
| Cytochrome c1, heme protein, mitochondrial | O | 248 | Pseudomonas Chlororaphis Subsp. Piscium | MTAAEHGLHAPAYAWSHNGPFETFDHASIRRGYQVYREVCAACHSLDRVAWRTLVGVSHTNEEVRNMAEEFEYDDEPDEQGNPKKRPGKLSDYIPGPYPNEQAARAANQGALPPDLSLIVKARHGGCDYIFSLLTGYPDEPPAGVALPPGSNYNPYFPGGSIAMARVLFDDMVEYEDGTPATTSQMAKDVTTFLNWCAEPEHDERKRLGLKTVIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPKPRK |
| Cytochrome c oxidase subunit 5A, mitochondrial | E | 128 | Pseudomonas Chlororaphis Subsp. Piscium | ALSNAAVMDLQSRWENMPSTEQQDIVSKLSERQKLPWAQLTEPEKQAVWYISYGEWGPRRPVLNKGDSSFIAKGVAAGLLFSVGLFAVVRMAGGQDAKTMNKEWQLKSDEYLKSKNANPWGGYSQVQS |
| Cytochrome b-c1 complex subunit Rieske, mitochondrial | P | 185 | Pseudomonas Chlororaphis Subsp. Piscium | KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFDGDKVIVG |
| Cytochrome c oxidase subunit 6, mitochondrial | F | 99 | Pseudomonas Chlororaphis Subsp. Piscium | ETFEEFTARYEKEFDEAYDLFEVQRVLNNCFSYDLVPAPAVIEKALRAARRVNDLPTAIRVFEALKYKVENEDQYKAYLDELKDVRQELGVPLKEELFP |
| Cytochrome c oxidase subunit 7, mitochondrial | G | 55 | Pseudomonas Chlororaphis Subsp. Piscium | NKVIQLQKIFQSSTKPLWWRHPRSALYLYPFYAIFAVAVVTPLLYIPNAIRGIKA |
| Cytochrome b-c1 complex subunit 7, mitochondrial | R | 126 | Pseudomonas Chlororaphis Subsp. Piscium | PQSFTSIARIGDYILKSPVLSKLCVPVANQFINLAGYKKLGLKFDDLIAEENPIMQTALRRLPEDESYARAYRIIRAHQTELTHHLLPRNEWIKAQEDVPYLLPYILEAEAAAKEKDELDNIEVSK |
| Cytochrome c oxidase subunit 8, mitochondrial | H | 51 | Pseudomonas Chlororaphis Subsp. Piscium | VHFKDGVYENIPFKVKGRKTPYALSHFGFFAIGFAVPFVACYVQLKKSGAF |
| Cytochrome b-c1 complex subunit 8, mitochondrial | S | 93 | Pseudomonas Chlororaphis Subsp. Piscium | GPPSGKTYMGWWGHMGGPKQKGITSYAVSPYAQKPLQGIFHNAVFNSFRRFKSQFLYVLIPAGIYWYWWKNGNEYNEFLYSKAGREELERVNV |
| Cytochrome c oxidase subunit 9, mitochondrial | I | 53 | Pseudomonas Chlororaphis Subsp. Piscium | IAPITGTIKRRVIMDIVLGFSLGGVMASYWWWGFHMDKINKREKFYAELAERK |
| Cytochrome b-c1 complex subunit 6, mitochondrial | Q | 75 | Pseudomonas Chlororaphis Subsp. Piscium | EVTDQLEDLREHFKNTEEGKALVHHYEECAERVKIQQQQPGYADLEHKEDCVEEFFHLQHYLDTATAPRLFDKLK |
| Cytochrome b-c1 complex subunit 9, mitochondrial | T | 54 | Pseudomonas Chlororaphis Subsp. Piscium | SSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDVKARIA |
| Cytochrome b-c1 complex subunit 10, mitochondrial | U | 44 | Pseudomonas Chlororaphis Subsp. Piscium | KTGLHFGRLSLRSLTAYAPNLMLWGGASMLGLFVFTEGWPKFQD |
| Cytochrome b-c1 complex subunit 10, mitochondrial | V | 51 | Pseudomonas Chlororaphis Subsp. Piscium | TGLHFGRLSLRSLTAYAPNLMLWGGASMLGLFVFTEGWPKFQDTLYKKIPL |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-04-10 Deposition Author(s): Berndtsson, J. , Ott, M. , Rathore, S.