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6YCS
Human transcription cofactor pc4 dna-binding domain in complex with full phosphorothioate 5-10-5 2'-o-methyl dna gapmer antisense oligonucleotide.
PDB DOI: 10.2210/pdb6ycs/pdb
Classification: TRANSCRIPTION Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2020-03-19 Deposition Author(s): Anderson, B. , Crooke, S.T. , Hyjek-Skladanowska, M. , Liang, X. , Napiorkowska, A. , Nowotny, M. , Seth, P.P. , Tanowitz, M. , Vickers, T.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.05 Å
Human transcription cofactor pc4 dna-binding domain in complex with full phosphorothioate 5-10-5 2'-o-methyl dna gapmer antisense oligonucleotide.
Anderson, B. , Crooke, S.T. , Hyjek-Skladanowska, M. , Liang, X. , Napiorkowska, A. , Nowotny, M. , Seth, P.P. , Tanowitz, M. , Vickers, T.A.
Primary Citation of Related Structures: 6YCS
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| PC4 protein | A | 72 | Homo Sapiens , Synthetic Construct | RGSHSDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
| PC4 protein | B | 72 | Homo Sapiens , Synthetic Construct | RGSHSDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
| PC4 protein | C | 72 | Homo Sapiens , Synthetic Construct | RGSHSDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
| PC4 protein | D | 72 | Homo Sapiens , Synthetic Construct | RGSHSDNMFQIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISDIDDAVRKL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*(OKQ))-D(P*(OKT))-R(P*(RFJ))-D(*(OKQ)P*(OKT)P*(AS)P*(GS)P*(OKN)P*(OKN)P*(PST)P*(OKN)P*(PST)P*(GS)P*(GS)P*(AS)P*(OKT)P*(OKT))-3') | e | 17 | NA | CUGCUXGCCTCTGGXUU |
| DNA (5'-D(P*(OKQ))-D(P*(OKT))-R(P*(RFJ))-D(*(OKQ)P*(OKT)P*(AS)P*(GS)P*(OKN)P*(OKN)P*(PST)P*(OKN)P*(PST)P*(GS)P*(GS)P*(AS)P*(OKT)P*(OKT))-3') | f | 17 | NA | CUGCUXGCCTCTGGAUU |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-03-19 Deposition Author(s): Anderson, B. , Crooke, S.T. , Hyjek-Skladanowska, M. , Liang, X. , Napiorkowska, A. , Nowotny, M. , Seth, P.P. , Tanowitz, M. , Vickers, T.A.