PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6YBP

Propionyl-coa carboxylase of methylorubrum extorquens with bound coa

PDB DOI: 10.2210/pdb6ybp/pdb

Classification: LIGASE
Organism(s): Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1)

Deposited: 2020-03-17
Deposition Author(s): Erb, T.J. , Marchal, D.M. , Scheffen, M. , Schuller, J.M. , Schuller, S.K. , Zarzycki, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.48 Å

6ybp
Literature

Propionyl-coa carboxylase of methylorubrum extorquens with bound coa

Erb, T.J. , Marchal, D.M. , Scheffen, M. , Schuller, J.M. , Schuller, S.K. , Zarzycki, J.

Primary Citation of Related Structures: 6YBP


Proteins
Molecule Chains Sequence Length Organism Sequence
Propionyl-CoA carboxylase beta chain A 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase beta chain B 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase beta chain C 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase beta chain D 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase beta chain E 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase beta chain F 510 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MKDILEKLEERRAQARLGGGEKRLEAQHKRGKLTARERIELLLDHGSFEEFDMFVQHRSTDFGMEKQKIPGDGVVTGWGTVNGRTVFLFSKDFTVFGGSLSEAHAAKIVKVQDMALKMRAPIIGIFDAGGARIQEGVAALGGYGEVFRRNVAASGVIPQISVIMGPCAGGDVYSPAMTDFIFMVRDTSYMFVTGPDVVKTVTNEVVTAEELGGAKVHTSKSSIADGSFENDVEAILQIRRLLDFLPANNIEGVPEIESFDDVNRLDKSLDTLIPDNPNKPYDMGELIRRVVDEGDFFEIQAAYARNIITGFGRVEGRTVGFVANQPLVLAGVLDSDASRKAARFVRFCNAFSIPIVTFVDVPGFLPGTAQEYGGLIKHGAKLLFAYSQATVPLVTIITRKAFGGAYDVMASKHVGADLNYAWPTAQIAVMGAKGAVEIIFRAEIGDADKIAERTKEYEDRFLSPFVAAERGYIDEVIMPHSTRKRIARALGMLRTKEMEQPWKKHDNIPL
Propionyl-CoA carboxylase alpha subunit G 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Propionyl-CoA carboxylase alpha subunit H 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Propionyl-CoA carboxylase alpha subunit I 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Propionyl-CoA carboxylase alpha subunit J 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Propionyl-CoA carboxylase alpha subunit K 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Propionyl-CoA carboxylase alpha subunit L 667 Methylorubrum Extorquens (Strain Atcc 14718 / Dsm 1338 / Jcm 2805 / Ncimb 9133 / Am1) MFDKILIANRGEIACRIIKTAQKMGIKTVAVYSDADRDAVHVAMADEAVHIGPAPAAQSYLLIEKIIDACKQTGAQAVHPGYGFLSERESFPKALAEAGIVFIGPNPGAIAAMGDKIESKKAAAAAEVSTVPGFLGVIESPEHAVTIADEIGYPVMIKASAGGGGKGMRIAESADEVAEGFARAKSEASSSFGDDRVFVEKFITDPRHIEIQVIGDKHGNVIYLGERECSIQRRNQKVIEEAPSPLLDEETRRKMGEQAVALAKAVNYDSAGTVEFVAGQDKSFYFLEMNTRLQVEHPVTEMITGLDLVELMIRVAAGEKLPLSQDQVKLDGWAVESRVYAEDPTRNFLPSIGRLTTYQPPEEGPLGGAIVRNDTGVEEGGEIAIHYDPMIAKLVTWAPTRLEAIEAQATALDAFAIEGIRHNIPFLATLMAHPRWRDGRLSTGFIKEEFPEGFIAPEPEGPVAHRLAAVAAAIDHKLNIRKRGISGQMRDPSLLTFQRERVVVLSGQRFNVTVDPDGDDLLVTFDDGTTAPVRSAWRPGAPVWSGTVGDQSVAIQVRPLLNGVFLQHAGAAAEARVFTRREAELADLMPVKENAGSGKQLLCPMPGLVKQIMVSEGQEVKNGEPLAIVEAMKMENVLRAERDGTISKIAAKEGDSLAVDAVILEFA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-03-17
Deposition Author(s): Erb, T.J. , Marchal, D.M. , Scheffen, M. , Schuller, J.M. , Schuller, S.K. , Zarzycki, J.