6Y64
Structure of sheep polyomavirus vp1 in complex with 6'-sialyllactosamine
PDB DOI: 10.2210/pdb6y64/pdb
Classification: VIRAL PROTEIN Organism(s): Sheep Polyomavirus 1
Deposited: 2020-02-26 Deposition Author(s): Rustmeier, N.H. , Stehle, T. , Stroh, L.J.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.6 Å
Structure of sheep polyomavirus vp1 in complex with 6'-sialyllactosamine
Rustmeier, N.H. , Stehle, T. , Stroh, L.J.
Primary Citation of Related Structures: 6Y64
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Capsid protein VP1 | A | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | B | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | C | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | D | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | E | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | F | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | G | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | H | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | I | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
| Capsid protein VP1 | J | 293 | Sheep Polyomavirus 1 | MGSSHHHHHHSSGLVPRGSHMGGIEVLAVRTGPDSITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTARISLPMLNQDMTSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGTGIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFDPNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQTTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTLRKRVVKN |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-02-26 Deposition Author(s): Rustmeier, N.H. , Stehle, T. , Stroh, L.J.