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6Y5E

Structure of human cgas (k394e) bound to the nucleosome (focused refinement of cgas-ncp subcomplex)

PDB DOI: 10.2210/pdb6y5e/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2020-02-25
Deposition Author(s): Cavadini, S. , Kempf, G. , Pathare, G.R. , Thoma, N.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.15 Å

6y5e
Literature

Structure of human cgas (k394e) bound to the nucleosome (focused refinement of cgas-ncp subcomplex)

Cavadini, S. , Kempf, G. , Pathare, G.R. , Thoma, N.H.

Primary Citation of Related Structures: 6Y5E


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.2 A 96 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGE
Histone H3.2 E 96 Homo Sapiens , Synthetic Construct PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLAAIHAKRVTIMPKDIQLARRIRGE
Cyclic GMP-AMP synthase K 362 Homo Sapiens , Synthetic Construct GASKLRAVLEKLKLSRDDISTAAGMVKGVVDHLLLRLKCDSAFRGVGLLNTGSYYEHVKISAPNEFDVMFKLEVPRIQLEEYSNTRAYYFVKFKRNPKENPLSQFLEGEILSASKMLSKFRKIIKEEINDIKDTDVIMKRKRGGSPAVTLLISEKISVDITLALESKSSWPASTQEGLRIQNWLSAKVRKQLRLKPFYLVPKHAKEGNGFQEETWRLSFSHIEKEILNNHGKSETCCENKEEKCCRKDCLKLMKYLLEQLKERFKDKKHLDKFSSYHVKTAFFHVCTQNPQDSQWDRKDLGLCFDNCVTYFLQCLRTEKLENYFIPEFNLFSSNLIDKRSKEFLTKQIEYERNNEFPVFDEF
Histone H4 B 81 Homo Sapiens , Synthetic Construct LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 2-C C 107 Homo Sapiens , Synthetic Construct RAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLP
Histone H2B type 1-K D 93 Homo Sapiens , Synthetic Construct SRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Histone H4 F 83 Homo Sapiens , Synthetic Construct KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 2-C G 108 Homo Sapiens , Synthetic Construct RAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPK
Histone H2B type 1-K H 94 Homo Sapiens , Synthetic Construct RSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (153-MER) i 153 NA ATCCTGGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGAT
DNA (153-MER) j 153 NA ATCACAGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCCAGGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-25
Deposition Author(s): Cavadini, S. , Kempf, G. , Pathare, G.R. , Thoma, N.H.