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FASTA Sequence PDB Format mmCIF Format
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6XUP

Archaeoglobus fulgidus argonaute protein with dna oligoduplex 5'-patcgtggccacgat

PDB DOI: 10.2210/pdb6xup/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Archaeoglobus Fulgidus , Synthetic Construct

Deposited: 2020-01-20
Deposition Author(s): Grazulis, S. , Zaremba, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

6xup
Literature

Archaeoglobus fulgidus argonaute protein with dna oligoduplex 5'-patcgtggccacgat

Grazulis, S. , Zaremba, M.

Primary Citation of Related Structures: 6XUP


Proteins
Molecule Chains Sequence Length Organism Sequence
Piwi protein A 441 Archaeoglobus Fulgidus , Synthetic Construct MGSSHHHHHHSQDPMMEYKIVENGLTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNNQFSSLINQLKSQISSKIDEVWHIHNINISEFIYDSPHFDSIKSQVDNAIDTGVDGIMLVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLVQFVSKLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNEISPIVTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELKKQEMVSRDVKYAILHLNETHPFWVMGDPNNRFHPYEGTKVKLSSKRYLLTLLQPYLKRNGLEMVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKMNWRGFRSRNLPVTVNYPKLVAGIIANVNRYGGYPINPEGNRSLQTNPWFL
Piwi protein B 441 Archaeoglobus Fulgidus , Synthetic Construct MGSSHHHHHHSQDPMMEYKIVENGLTYRIGNGASVPISNTGELIKGLRNYGPYEVPSLKYNQIALIHNNQFSSLINQLKSQISSKIDEVWHIHNINISEFIYDSPHFDSIKSQVDNAIDTGVDGIMLVLPEYNTPLYYKLKSYLINSIPSQFMRYDILSNRNLTFYVDNLLVQFVSKLGGKPWILNVDPEKGSDIIIGTGATRIDNVNLFCFAMVFKKDGTMLWNEISPIVTSSEYLTYLKSTIKKVVYGFKKSNPDWDVEKLTLHVSGKRPKMKDGETKILKETVEELKKQEMVSRDVKYAILHLNETHPFWVMGDPNNRFHPYEGTKVKLSSKRYLLTLLQPYLKRNGLEMVTPIKPLSVEIVSDNWTSEEYYHNVHEILDEIYYLSKMNWRGFRSRNLPVTVNYPKLVAGIIANVNRYGGYPINPEGNRSLQTNPWFL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' r 14 NA ATCGTGGCCACGAT
5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' s 14 NA ATCGTGGCCACGAT
5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' p 14 NA ATCGTGGCCACGAT
5'-D(*AP*TP*CP*GP*TP*GP*GP*CP*CP*AP*CP*GP*AP*TP)-3' q 14 NA ATCGTGGCCACGAT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-01-20
Deposition Author(s): Grazulis, S. , Zaremba, M.