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FASTA Sequence PDB Format mmCIF Format
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6XSK

Cryo-em structure of vaccine-elicited rhesus antibody 789-203-3c12 in complex with stabilized si06 (a/solomon islands/3/06) influenza hemagglutinin trimer

PDB DOI: 10.2210/pdb6xsk/pdb

Classification: IMMUNE SYSTEM/Viral Protein
Organism(s): Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta

Deposited: 2020-07-15
Deposition Author(s): Cerutti, G. , Gorman, J. , Kwong, P.D. , Shapiro, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.85 Å

6xsk
Literature

Cryo-em structure of vaccine-elicited rhesus antibody 789-203-3c12 in complex with stabilized si06 (a/solomon islands/3/06) influenza hemagglutinin trimer

Cerutti, G. , Gorman, J. , Kwong, P.D. , Shapiro, L.

Primary Citation of Related Structures: 6XSK


Proteins
Molecule Chains Sequence Length Organism Sequence
789-203-3C12 Fab Light Chain L 214 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
789-203-3C12 Fab Light Chain J 214 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
789-203-3C12 Fab Light Chain K 214 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta DIQMTQSPSSLSASVGDTVTITCRASQSISSWLAWYQQKPGKAPNLLIYRASTLQSGVPSRFSGSGSGTDFTLTISSLQSEDFATYFCQQSTSSPFTFGPGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
789-203-3C12 Fab Heavy Chain H 455 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
789-203-3C12 Fab Heavy Chain G 455 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
789-203-3C12 Fab Heavy Chain I 455 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta QVQLQESGPGLVKPSEILSLTCAVSGGSFSSYCWGWIRQPPGKGLEWIGSICGSGGSNYLNPSLKSRVTLSVDTSKNQFSLILNSVTAADTAVYYCAREGITIFGVVIPRVLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
Hemagglutinin HA1 chain A 343 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta MKVKLLVLLCTFTATYADTICIGYHANNSTDTVDTVCEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHKENAYVSVVSSHYSRKFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin HA1 chain C 343 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta MKVKLLVLLCTFTATYADTICIGYHANNSTDTVDTVCEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHKENAYVSVVSSHYSRKFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin HA1 chain E 343 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta MKVKLLVLLCTFTATYADTICIGYHANNSTDTVDTVCEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHKENAYVSVVSSHYSRKFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPSIQSR
Hemagglutinin HA2 chain B 222 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINCITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKIDGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Hemagglutinin HA2 chain D 222 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINCITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKIDGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Hemagglutinin HA2 chain F 222 Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) , Macaca Mulatta GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINCITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKIDGVSGRLVPRGSPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-07-15
Deposition Author(s): Cerutti, G. , Gorman, J. , Kwong, P.D. , Shapiro, L.