PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6XQB

Sars-cov-2 rdrp/rna complex

PDB DOI: 10.2210/pdb6xqb/pdb

Classification: VIRAL PROTEIN, TRANSFERASE/HYDROLASE
Organism(s): Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct

Deposited: 2020-07-09
Deposition Author(s): Liu, B. , Shi, W. , Yang, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

6xqb
Literature

Sars-cov-2 rdrp/rna complex

Liu, B. , Shi, W. , Yang, Y.

Primary Citation of Related Structures: 6XQB


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase A 941 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQLEHHHHHH
Non-structural protein 8 B 207 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQLEHHHHHH
Non-structural protein 8 D 207 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MAIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQLEHHHHHH
Non-structural protein 7 C 92 Severe Acute Respiratory Syndrome Coronavirus 2 , Synthetic Construct MSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQLEHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') e 9 NA GUGGGCCCA
RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') f 9 NA GUGGGCCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-07-09
Deposition Author(s): Liu, B. , Shi, W. , Yang, Y.