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FASTA Sequence PDB Format mmCIF Format
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6XN5

Structure of the lactococcus lactis csm apo- crispr-cas complex

PDB DOI: 10.2210/pdb6xn5/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Clavularia Sp.

Deposited: 2020-07-02
Deposition Author(s): Li, H. , Rai, J. , Sridhara, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.97 Å

6xn5
Literature

Structure of the lactococcus lactis csm apo- crispr-cas complex

Li, H. , Rai, J. , Sridhara, S.

Primary Citation of Related Structures: 6XN5


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated protein Csm3 I 214 Clavularia Sp. MKLVIEGTIVLKTGMHIGGSSDFSAIGAVASPVVRDTLTRLPLIPGSSLKGKMRYLLAKELNNGILLNEPNNDQDEILRLFGSSEKDKIRRARLKFNDIKLSNLAELETFNVSSTEVKFENTINRKTAVANPRQIERVIAGSKFDFEIFYNLDDIKEVEKDFENIKQGFDLLEFDYLGGHGTRGSGRIAFENLSVITAVGNFEKINTLNEILGA
CRISPR-associated protein Csm3 F 214 Clavularia Sp. MKLVIEGTIVLKTGMHIGGSSDFSAIGAVASPVVRDTLTRLPLIPGSSLKGKMRYLLAKELNNGILLNEPNNDQDEILRLFGSSEKDKIRRARLKFNDIKLSNLAELETFNVSSTEVKFENTINRKTAVANPRQIERVIAGSKFDFEIFYNLDDIKEVEKDFENIKQGFDLLEFDYLGGHGTRGSGRIAFENLSVITAVGNFEKINTLNEILGA
CRISPR-associated protein Csm3 H 214 Clavularia Sp. MKLVIEGTIVLKTGMHIGGSSDFSAIGAVASPVVRDTLTRLPLIPGSSLKGKMRYLLAKELNNGILLNEPNNDQDEILRLFGSSEKDKIRRARLKFNDIKLSNLAELETFNVSSTEVKFENTINRKTAVANPRQIERVIAGSKFDFEIFYNLDDIKEVEKDFENIKQGFDLLEFDYLGGHGTRGSGRIAFENLSVITAVGNFEKINTLNEILGA
CRISPR-associated protein Csm3 G 214 Clavularia Sp. MKLVIEGTIVLKTGMHIGGSSDFSAIGAVASPVVRDTLTRLPLIPGSSLKGKMRYLLAKELNNGILLNEPNNDQDEILRLFGSSEKDKIRRARLKFNDIKLSNLAELETFNVSSTEVKFENTINRKTAVANPRQIERVIAGSKFDFEIFYNLDDIKEVEKDFENIKQGFDLLEFDYLGGHGTRGSGRIAFENLSVITAVGNFEKINTLNEILGA
CRISPR-associated protein Cas10 A 756 Clavularia Sp. MDKINLVCGSLLHNIGKIIYRGTSERAKHSKLGGDFIKSFEQFRNTELTDCIRYHHAQEITSVKSNKEKNSLFYITYIADNISSGMDRRKDLEEGAEGFNWDKKVALGSVFNVLNEKEKGRQNYSYPFVARTRIKEEPLNFPTATQNQYTTSYYDGLITDMKTILQRLKPDKEHINSLLQMMESLWSYVPSSTDKNQLVDISLYDHSRTTAAIASAIYDYFQAENITDYQKELFDYNATEFYDKNAFLMMNFDMSGVQNFIYNISGSKALKSLRARSFYLDMLLEYISDNLLEKLELSRANILYVGGGHAYLLLANTNKTKAILSDFEHDLKTWFLDKFKIDLYVAMAYTEVSANDLMNHNGHYRDIYRRLSQKTSAKKANRYTAEEILNLNHQGTENARECRECKRSDLLIEEDDICEICDSLQKVSRDLTRENIFVIANEGVLDMPFGKKMSALSYSQADKLKKSNAEVQIYAKNISEIGQNLMTRIDMGDYTYRSDFHEMLEEVEVGINRLGVLRADVDNLGQAFINGIPDDYLSISRTATFSRAMSRFFKNYLNQLLAEKSYKINVIYAGGDDLFMIGAWQDILDFSIVLKQKFADFTQNKLSISAGIGMFREKYPVARMASLTGDLEDAAKDYKPDERAVQATKNAVTLFDATNVFSWDTLENDIFVKLDAITKNFEKLDETGKAFIYRLIDLLRGVNENQQINIARLAYTLSRMEEKIGKTFAQELYNWANADRKTLIMALEIYILKTRE
CRISPR-associated protein Csm4 B 296 Clavularia Sp. MKIIKLYFESPVHFGEKRLSESKITFSADTLFSALMIEAVGLGKEDEFYQLASNNLVKFSDAFPFIDQYYYIPKPMFNLKLEKEDENPSKAFKKLLYVPIDSLEDYLSGGLDAYFERESFNLGKLALSEKVQQHDFKDSEPYNVGTFTFKENTGLYVLIEQTHPLLEELLENLQYSGIGGKRNSGYGKFKFEILEDSDIEDLFSAKGNRKILLSGALPKDAELEQALKNASYLLERRGGFVQSDTYATNLVKKQDLYVFKSGSTFENSFDGDIYQVGKKGNHPVYKYAKSFFLEVS
CRISPR-associated protein Csm5 J 352 Clavularia Sp. MKKTYRVTLTALGPIFIGGGEKLKKYEYIFDKQKKVAHMIDHTKFTKYLLEKNLLDDFTSRVNSHFDLYDYLVNKKGIVFMPLVKYSVPVAQFRTEVKNRFGKPISSPPMNDLNTFVKDAFGRPYIPGSSLKGALRTAILNDLKEDTKENEVFAHLQVSDSETIDLENLKVYQKVDYSKTAKPLPLYRECLKPNTEITFTVSFDDEYLTLKKIQNALHKTYQHYYIKWLKGGKVGETLIKGVYDSHADELKKNTFALDQPSQNQGEIIYIGGGAGFVSKTLHYKSKNRDQARNDSFDILKQLFRTTYSKMRSVPDNVPVALKLAVETKTFNGRVTGKHYLEMGKARIKLEEL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Crispr RNA r 32 NA ACGAGAACAUACGUUCUUUGAACCAAGCUUCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-07-02
Deposition Author(s): Li, H. , Rai, J. , Sridhara, S.