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6XKZ
R. capsulatus ciii2civ tripartite super-complex, conformation b (sc-1b)
PDB DOI: 10.2210/pdb6xkz/pdb
Classification: TRANSLOCASE/Oxidoreductase Organism(s): Bacillus Pumilus
Deposited: 2020-06-27 Deposition Author(s): Braitbard, M. , Daldal, F. , Garcia, B.A. , Kim, H.J. , Murakami, K. , Ozturk, Y. , Schneidman-Duhovny, D. , Selamoglu, N. , Steimle, S. , Van Eeuwen, T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 7.2 Å
R. capsulatus ciii2civ tripartite super-complex, conformation b (sc-1b)
Braitbard, M. , Daldal, F. , Garcia, B.A. , Kim, H.J. , Murakami, K. , Ozturk, Y. , Schneidman-Duhovny, D. , Selamoglu, N. , Steimle, S. , Van Eeuwen, T.
Primary Citation of Related Structures: 6XKZ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Ubiquinol-cytochrome c reductase iron-sulfur subunit | E | 191 | Bacillus Pumilus | MSHAEDNAGTRRDFLYHATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKLG |
| Ubiquinol-cytochrome c reductase iron-sulfur subunit | R | 191 | Bacillus Pumilus | MSHAEDNAGTRRDFLYHATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDETTIKLG |
| Cytochrome b | C | 437 | Bacillus Pumilus | MSGIPHDHYEPKTGIEKWLHDRLPIVGLVYDTIMIPTPKNLNWWWIWGIVLAFTLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRDVNGGWAMRYIHANGASLFFLAVYIHIFRGLYYGSYKAPREITWIVGMVIYLLMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGIGPSIQAWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHTTGNNNPTGVEVRRTSKADAEKDTLPFWPYFVIKDLFALALVLLGFFAVVAYMPNYLGHPDNYVQANPLSTPAHIVPEWYFLPFYAILRAFAADVWVVILVDGLTFGIVDAKFFGVIAMFGAIAVMALAPWLDTSKVRSGAYRPKFRMWFWFLVLDFVVLTWVGAMPTEYPYDWISLIASTYWFAYFLVILPLLGATEKPEPIPASIEEDFNSHYGNPAE |
| Cbb3-type cytochrome c oxidase subunit CcoP,Cytochrome c-type cyt cy | P | 474 | Bacillus Pumilus | MSKKPTTKKEVQTTGHSWDGIEELNTPLPRWWLWTFYATIVWGVAYSIAMPAWPIFASGATPGILGSSTRADVEKDIAKFAEMNKAVEDKLVATDLTAIAADPELVTYTRNAGAAVFRTWCAQCHGAGAGGNTGFPSLLDGDWLHGGSIETIYTNIKHGIRDPLDPDTLPVANMPAHLTDELLEPAQIDDVVQYVLKISGQPADEARATAGQQVFADNCVSCHGEDAKGMVEMGAPNLTDGIWLYGGDANTITTTIQLGRGGVMPSWSWAADGAKPRLSEAQIRAVASYVHSLGGGQLFATRPATAVAVGADGKALLPSVDEAAMPAKAPAAAAPAAETAEAAAPAEPAAPPPPAYVEVDPATITGDAKAGEEKFNKTCKACHKIDGKNAVGPHLNGVIGRATATVEGFKYSTAMKNHVGNWTPERLDIYLVSPKAEVPGTKMSFVGLPEAADRANVIAYLNTLPRDYKDDDDK |
| Cytochrome c1 | D | 279 | Bacillus Pumilus | MKKLLISAVSALVLGSGAAFANSNVPDHAFSFEGIFGKYDQAQLRRGFQVYNEVCSACHGMKFVPIRTLADDGGPQLDPTFVREYAAGLDTIIDKDSGEERDRKETDMFPTRVGDGMGPDLSVMAKARAGFSGPAGSGMNQLFKGMGGPEYIYNYVIGFEENPECAPEGIDGYYYNKTFQIGGVPDTCKDAAGVKITHGSWARMPPPLVDDQVTYEDGTPATVDQMAQDVSAFLMWAAEPKLVARKQMGLVAMVMLGLLSVMLYLTNKRLWAPYKGHKA |
| Cytochrome c1 | Q | 279 | Bacillus Pumilus | MKKLLISAVSALVLGSGAAFANSNVPDHAFSFEGIFGKYDQAQLRRGFQVYNEVCSACHGMKFVPIRTLADDGGPQLDPTFVREYAAGLDTIIDKDSGEERDRKETDMFPTRVGDGMGPDLSVMAKARAGFSGPAGSGMNQLFKGMGGPEYIYNYVIGFEENPECAPEGIDGYYYNKTFQIGGVPDTCKDAAGVKITHGSWARMPPPLVDDQVTYEDGTPATVDQMAQDVSAFLMWAAEPKLVARKQMGLVAMVMLGLLSVMLYLTNKRLWAPYKGHKA |
| Cytochrome c oxidase, Cbb3-type, subunit I | N | 532 | Bacillus Pumilus | MWDYVKLVALGVVVAIAAYAASQARDLPYMVNMVEVALAAVIAFIWVLRTMGDAKPSKDEYFDGVIRAGVIATTFWGIVGFLVAVIIAFQLAFPALNLEFGNGMLNFGRLRPLHTSAVIFAFGGNALIASAFYVVQRTSAARLFGGTALGWFVFWGWQLIIVTAATSYLLGGSQGKEYAELNWHLDILVAIVWVAYLIAFLGTIFKRKEPHIYVANWFYLSFIVTIAMLHIVNNLAVPVSIFGTKSVQLMAGVQDAMTQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYKLSIVHFWALIFLYIWAGPHHLHYTALPDWASTLGMVMSVILWMPSWGGMINGLMTLSGAWDKLRTDPVIRMMVVSIGFYGMSTFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGMLYFLTPRLWGRSGLYSLKLVSWHFWLATIGIVLYASSMWVSGIMEGLMWREVDAQGFLVNGFADTVGAKFPMNVVRGVGGVLYLTGGLIMAYNLWATVAKQPKTANLAVAVPAE |
| Cytochrome c oxidase, Cbb3-type, subunit II | O | 242 | Bacillus Pumilus | MSIMDKHHVLEKNATLLLIFAFLVVTIGGIVEIAPLFYLENTIEKVEGMRPYTPLELTGRDIYIREGCYVCHSQMIRPMRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGGRYSDAWHVEHLSNPQSVVPESVMPSYSYLANVPLDSTWIEDRVSTDALVGVPYSAEMIAAAKADFVAQADPNADSATLVANYGEKVNIRNFDGKPGLTEMDALVAYLQVLGTMVDFSTFQPVASR |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-06-27 Deposition Author(s): Braitbard, M. , Daldal, F. , Garcia, B.A. , Kim, H.J. , Murakami, K. , Ozturk, Y. , Schneidman-Duhovny, D. , Selamoglu, N. , Steimle, S. , Van Eeuwen, T.