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FASTA Sequence PDB Format mmCIF Format
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6X9J

Human dnmt1(729-1600) bound to zebularine-containing 12mer dsdna and inhibitor gsk3830052

PDB DOI: 10.2210/pdb6x9j/pdb

Classification: TRANSFERASE/TRANSFERASE INHIBITOR/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2020-06-02
Deposition Author(s): Cheng, X. , Horton, J.R. , Pathuri, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.79 Å

6x9j
Literature

Human dnmt1(729-1600) bound to zebularine-containing 12mer dsdna and inhibitor gsk3830052

Cheng, X. , Horton, J.R. , Pathuri, S.

Primary Citation of Related Structures: 6X9J


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA (cytosine-5)-methyltransferase 1 A 874 Homo Sapiens , Synthetic Construct HMNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNRFYFLEAYNAKSKSFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEIKLPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKKFVSNITRLSSGPFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSSSGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIGLEIKLCMLAKA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*GP*GP*CP*(5CM)P*GP*CP*CP*TP*GP*C)-3') c 12 NA GAGGCCGCCTGC
DNA (5'-D(*GP*CP*AP*GP*G)-R(P*(PYO))-D(P*GP*GP*CP*CP*TP*C)-3') d 12 NA GCAGGUGGCCTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-06-02
Deposition Author(s): Cheng, X. , Horton, J.R. , Pathuri, S.