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6X68

Cryo-em structure of piggybac transposase synaptic complex with hairpin dna (snhp)

PDB DOI: 10.2210/pdb6x68/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Streptomyces Caespitosus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2020-05-27
Deposition Author(s): Chen, Q. , Dyda, F. , Hickman, A.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.66 Å

6x68
Literature

Cryo-em structure of piggybac transposase synaptic complex with hairpin dna (snhp)

Chen, Q. , Dyda, F. , Hickman, A.B.

Primary Citation of Related Structures: 6X68


Proteins
Molecule Chains Sequence Length Organism Sequence
Transposase C 594 Streptomyces Caespitosus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSLDDEHILSALLQSDDELVGEDSDSEISDHVSEDDVQSDTEEAFIDEVHEVQPTSSGSEILDEQNVIEQPGSSLASNKILTLPQRTIRGKNKHCWSTSKSTRRSRVSALNIVRSQRGPTRMCRNIYDPLLCFKLFFTDEIISEIVKWTNAEISLKRRESMTGATFRDTNEDEIYAFFGILVMTAVRKDNHMSTDDLFDRSLSMVYVSVMSRDRFDFLIRCLRMDDKSIRPTLRENDVFTPVRKIWDLFIHQCIQNYTPGAHLTIDEQLLGFRGRCPFRMYIPNKPSKYGIKILMMCDSGTKYMINGMPYLGRGTQTNGVPLGEYYVKELSKPVRGSCRNITCDNWFTSIPLAKNLLQEPYKLTIVGTVRSNKREIPEVLKNSRSRPVGTSMFCFDGPLTLVSYKPKPAKMVYLLSSCDEDASINESTGKPQMVMYYNQTKGGVDTLDQMCSVMTCSRKTNRWPMALLYGMINIACINSFIIYSHNVSSKGEKVQSRKKFMRNLYMSLTSSFMRKRLEAPTLKRYLRDNISNILPNEVPGTSDDSTEEPVTKKRTYCTYCPSKIRRKANASCKKCKKVICREHNIDMCQSCF
Transposase D 594 Streptomyces Caespitosus , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGSSLDDEHILSALLQSDDELVGEDSDSEISDHVSEDDVQSDTEEAFIDEVHEVQPTSSGSEILDEQNVIEQPGSSLASNKILTLPQRTIRGKNKHCWSTSKSTRRSRVSALNIVRSQRGPTRMCRNIYDPLLCFKLFFTDEIISEIVKWTNAEISLKRRESMTGATFRDTNEDEIYAFFGILVMTAVRKDNHMSTDDLFDRSLSMVYVSVMSRDRFDFLIRCLRMDDKSIRPTLRENDVFTPVRKIWDLFIHQCIQNYTPGAHLTIDEQLLGFRGRCPFRMYIPNKPSKYGIKILMMCDSGTKYMINGMPYLGRGTQTNGVPLGEYYVKELSKPVRGSCRNITCDNWFTSIPLAKNLLQEPYKLTIVGTVRSNKREIPEVLKNSRSRPVGTSMFCFDGPLTLVSYKPKPAKMVYLLSSCDEDASINESTGKPQMVMYYNQTKGGVDTLDQMCSVMTCSRKTNRWPMALLYGMINIACINSFIIYSHNVSSKGEKVQSRKKFMRNLYMSLTSSFMRKRLEAPTLKRYLRDNISNILPNEVPGTSDDSTEEPVTKKRTYCTYCPSKIRRKANASCKKCKKVICREHNIDMCQSCF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
hairpin DNA a 74 NA CATGCGTCAATTTTACGCAGACTATCTTTCTAGGGTTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATG
hairpin DNA b 74 NA CATGCGTCAATTTTACGCAGACTATCTTTCTAGGGTTAACCCTAGAAAGATAGTCTGCGTAAAATTGACGCATG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-05-27
Deposition Author(s): Chen, Q. , Dyda, F. , Hickman, A.B.