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FASTA Sequence PDB Format mmCIF Format
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6WPA

Structure of avar1 bound to dna half-site

PDB DOI: 10.2210/pdb6wpa/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Streptomyces Avermitilis , Synthetic Construct

Deposited: 2020-04-26
Deposition Author(s): Kapoor, I. , Nair, S.K. , Olivares, P.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.09 Å

6wpa
Literature

Structure of avar1 bound to dna half-site

Kapoor, I. , Nair, S.K. , Olivares, P.J.

Primary Citation of Related Structures: 6WPA


Proteins
Molecule Chains Sequence Length Organism Sequence
AvaR1 A 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 B 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 C 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 D 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 E 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 F 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 G 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE
AvaR1 H 245 Streptomyces Avermitilis , Synthetic Construct GSENLYFQSGSMARQERAIRTRQTILVAAAEVFDEVGYEAATISDVLKRSGVTKGALYFHFTSKQELAQAVLAEQVASLPRVPEQELKLQQSLDEALLLAHLLREGTGDPIVQGSVRLTVDQGSPRDHLNRRVPMQAWTEHTQSLFEEARAKGEILPHADVEALAKLFVGAFTGVQVLSRIMTGRADLAERVADLYRHLMPSFAMPGILVRLDFSPERGSRVYEAAMKQRESAAASTTDAARTLE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
PAL2-1-5'-GC m 28 NA GCAAGATACGTACTAGTACGTATCTTGC
PAL2-1-5'-GC n 28 NA GCAAGATACGTACTAGTACGTATCTTGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-04-26
Deposition Author(s): Kapoor, I. , Nair, S.K. , Olivares, P.J.