6WOQ
Structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1
PDB DOI: 10.2210/pdb6woq/pdb
Classification: IMMUNE SYSTEM/Viral Protein Organism(s): Hepatitis C Virus (Isolate H) , Homo Sapiens
Deposited: 2020-04-25 Deposition Author(s): Law, M. , Tzarum, N. , Wilson, I.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.667 Å
Structure of hepatitis c virus envelope glycoprotein e2 core from genotype 1a bound to neutralizing antibody hc1am and non neutralizing antibody e1
Law, M. , Tzarum, N. , Wilson, I.A.
Primary Citation of Related Structures: 6WOQ
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fab E1 heavy chain | A | 227 | Hepatitis C Virus (Isolate H) , Homo Sapiens | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS |
| Fab E1 heavy chain | C | 227 | Hepatitis C Virus (Isolate H) , Homo Sapiens | EVQLLEQSGAELKKPGSSVKVSCKPSDGTFRAYTLSWVRQAPGQTLEWMGRIMPTVGITNYAQKFQGRVTISADMSTATAYMELSSLRSDDTAIYYCAKGPYVGLGEGFSEWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS |
| Fab E1 light chain | B | 221 | Hepatitis C Virus (Isolate H) , Homo Sapiens | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE |
| Fab E1 light chain | D | 221 | Hepatitis C Virus (Isolate H) , Homo Sapiens | IELELVLTQSPLSLPVTLGQPASISCRSTQSLVYSDGNTYLNWFHQRAGQPPRRLIYKVSNRDSGVPERFSGSGSGTDFTLKISRVEAEDVGIYYCMQGAHWPPTFGGGTKVEINRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE |
| Envelope glycoprotein E2 | E | 191 | Hepatitis C Virus (Isolate H) , Homo Sapiens | ARQLINTNGSWHINSTALNCNESLNTGWLAGLFYQHKFDSSGCPERLASCGSSGCWHYPPRPCGIVPAKSVCGPVYCFTPSPVVVGTTDRSGAPTYSWGANDTDVFVLNNTRPPLGNWFGCTWMNSTGFTKVCGAPPGGPTDGGSGPWITPRCMVDYPYRLWHYPCTINYTIFKVRMYVGGVEHRLEAACN |
| Envelope glycoprotein E2 | F | 191 | Hepatitis C Virus (Isolate H) , Homo Sapiens | ARQLINTNGSWHINSTALNCNESLNTGWLAGLFYQHKFDSSGCPERLASCGSSGCWHYPPRPCGIVPAKSVCGPVYCFTPSPVVVGTTDRSGAPTYSWGANDTDVFVLNNTRPPLGNWFGCTWMNSTGFTKVCGAPPGGPTDGGSGPWITPRCMVDYPYRLWHYPCTINYTIFKVRMYVGGVEHRLEAACN |
| Fab HC1AM heavy chain | J | 229 | Hepatitis C Virus (Isolate H) , Homo Sapiens | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS |
| Fab HC1AM heavy chain | G | 229 | Hepatitis C Virus (Isolate H) , Homo Sapiens | QLQLVQSGAEVRKPGSSVKVSCKASGGTYNGEVISWVRQAPGEGLEWLGVFIPMFGIADYAQKFHGRVTISADRTTSTTYMELSSLRSEDTAIYYCAKVLQVGRNLVVRPLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS |
| Fab HC1AM light chain | K | 215 | Hepatitis C Virus (Isolate H) , Homo Sapiens | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
| Fab HC1AM light chain | H | 215 | Hepatitis C Virus (Isolate H) , Homo Sapiens | EIVLTQSPGILSLSPGERATLSCRASRTISRTHLAWYQQKPGQAPRLLIYGVSSRAIGIPDRFSGSGSGADFTLTISRLEPEDFAVYYCHQYGNSPQTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2020-04-25 Deposition Author(s): Law, M. , Tzarum, N. , Wilson, I.A.