Crystal structure of hiv-1 mi369 rns-ds.sosip prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.5 angstrom
PDB DOI: 10.2210/pdb6wix/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1
Deposited: 2020-04-10 Deposition Author(s): Kwong, P.D. , Lai, Y.-T. , Olia, A.
Crystal structure of hiv-1 mi369 rns-ds.sosip prefusion env trimer in complex with human antibodies 3h109l and 35o22 at 3.5 angstrom
Kwong, P.D. , Lai, Y.-T. , Olia, A.
Primary Citation of Related Structures: 6WIX
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Envelope glycoprotein gp41 | B | 153 | Homo Sapiens , Human Immunodeficiency Virus 1 | AVGIGAVFLGFLGAAGSTMGAASNTLTVQARQLLSGIVQQQNNLPRAPEAQQHLLKLTVWGIKQLQARVLAVERYLEVQQLLGIWGCSGKLICCTNVPWNSSWSNKSLDEIWNNMTWLQWDKEINNYTQLIYRLIEESQFQQEINEVELLALD |
35O22 scFv heavy chain | D | 134 | Homo Sapiens , Human Immunodeficiency Virus 1 | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSAST |
35O22 scFv light chain | E | 114 | Homo Sapiens , Human Immunodeficiency Virus 1 | SQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS |
Envelope glycoprotein gp120 | G | 498 | Homo Sapiens , Human Immunodeficiency Virus 1 | QQAENLWVTVYYGVPVWRDADTTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLDNVTEKFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCTNFNPNSTRNEGNGTAGGEGSNDTVTNREEIKNCSFNMTTELRDKKQRVHSLFYKLDIVQINKNQSQDNGSEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDEEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAKKEVKIRSENITNNVKTIIVQLVNPVIINCTRPNNNTRKSIRIGPGQAFYATGAIIGDIRQAHCNVSRSDWNKTLQQVARQLRKHFVNKTIIFTNSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWDSSTWDSNSTQANITELNENITLPCRIKQIINMWQRTGQCMYAPPIPGVISCVSNITGLLLTRDGGGNNNTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVERRRRRR |
3H109L Fab heavy chain | H | 244 | Homo Sapiens , Human Immunodeficiency Virus 1 | QVQLQESGPGLVKPSETLSLTCTVSGGSISNYYWSWIRQSPGKGLEWIGYISDSESTNYNPSLKSRVIISVDTSKNQLSLKLNSVTAADSAIYYCARAQQGKRIYGMVSFGEFFYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ |
3H109L Fab light chain | L | 217 | Homo Sapiens , Human Immunodeficiency Virus 1 | SVTSYVRPLSVALGETASISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPMQWKMHKSYSCQVTHEGSTVEKTVAPTECS |
Method: X-RAY DIFFRACTION
Deposited Date: 2020-04-10 Deposition Author(s): Kwong, P.D. , Lai, Y.-T. , Olia, A.