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FASTA Sequence PDB Format mmCIF Format
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6WC0

Crystal structure of acecas9 bound with guide rna and dna with 5'-nnntc-3' pam

PDB DOI: 10.2210/pdb6wc0/pdb

Classification: RNA BINDING PROTEIN/RNA/DNA
Organism(s): Castellaniella Defragrans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2020-03-28
Deposition Author(s): Das, A. , Li, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.61 Å

6wc0
Literature

Crystal structure of acecas9 bound with guide rna and dna with 5'-nnntc-3' pam

Das, A. , Li, H.

Primary Citation of Related Structures: 6WC0


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease, Csn1 family A 983 Castellaniella Defragrans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGGSEVGTVPVTWRLGVDVGERSIGLAAVSYEEDKPKEILAAVSWIHDGGVGDERSGASRLALRGMARRARRLRRFRRARLRDLDMLLSELGWTPLPDKNVSPVDAWLARKRLAEEYVVDETERRRLLGYAVSHMARHRGWRNPWTTIKDLKNLPQPSDSWERTRESLEARYSVSLEPGTVGQWAGYLLQRAPGIRLNPTQQSAGRRAELSNATAFETRLRQEDVLWELRCIADVQGLPEDVVSNVIDAVFCQKRPSVPAERIGRDPLDPSQLRASRACLEFQEYRIVAAVANLRIRDGSGSRPLSLEERNAVIEALLAQTERSLTWSDIALEILKLPNESDLTSVPEEDGPSSLAYSQFAPFDETSARIAEFIAKNRRKIPTFAQWWQEQDRTSRSDLVAALADNSIAGEEEQELLVHLPDAELEALEGLALPSGRVAYSRLTLSGLTRVMRDDGVDVHNARKTCFGVDDNWRPPLPALHEATGHPVVDRNLAILRKFLSSATMRWGPPQSIVVELGGGSAGGYAAVALRDRLLSYGEKNGVAQVAVFRGGVTAEARRWLDISIERLFSRVAIFAQSTSTKRLDRRHHAVDAVVLTTLTPGVAKTLADARSRRVSAEFWRRPSDVNRHSTEEPQSPAYRQWKESCSGLGDLLISTAARDSIAVAAPLRLRPTGALHEETLRAFSEHTVGAAWKGAELRRIVEPEVYAAFLALTDPGGRFLKVSPSEDVLPADENRHIVLSDRVLGPRDRVKLFPDDRGSIRVRGGAAYIASFHHARVFRWGSSHSPSFALLRVSLADLAVAGLLRDGVDVFTAELPPWTPAWRYASIALVKAVESGDAKQVGWLVPGDELDFGPEGVTTAAGDLSMFLKYFPERHWVVTGFEDDKRINLKPAFLSAEQAEVLRTERSDRPDTLTEAGEILAQFFPRCWRATVAKVLCHPGLTVIRRTALGQPRWRRGHLPYSWRPWSADPWSGGTPHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA (95-MER) b 94 NA GGAUGGCAAGAUCCUGGUAUGCUGGGGAGCCUGAAAAGGCUACCUAGCAAGACCCCUUCGUGGGGUCGCAUUCUUCACCCCCAGCAGGGGGUUC
DNA (30-MER) c 30 NA CGCCAGATATATACCAGGATCTTGCCATCC
DNA (5'-D(*AP*TP*AP*CP*TP*TP*GP*GP*CP*G)-3') d 10 NA ATATCTGGCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-03-28
Deposition Author(s): Das, A. , Li, H.