Crystal structure of the adcc-potent, weakly neutralizing hiv env co-receptor binding site antibody n12-i2 fab in complex with hiv-1 clade a/e gp120 and m48u1
PDB DOI: 10.2210/pdb6w4m/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct
Deposited: 2020-03-11 Deposition Author(s): Gohain, N. , Pazgier, M. , Tolbert, W.D.
Crystal structure of the adcc-potent, weakly neutralizing hiv env co-receptor binding site antibody n12-i2 fab in complex with hiv-1 clade a/e gp120 and m48u1
Gohain, N. , Pazgier, M. , Tolbert, W.D.
Primary Citation of Related Structures: 6W4M
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
clade A/E 93TH057 HIV-1 gp120 core | G | 353 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | VWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLQPCVKLTGGSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNGGSGSGGDIRKAYCEINGTKWNKVLKQVTEKLKEHFNNKTIIFQPPSGGDLEITMHSFNCRGEFFYCNTTQLFNNTCIGNETMKGCNGTITLPCKIKQIINMWQGTGQAMYAPPIDGKINCVSNITGILLTRDGGANNTSNETFRPGGGNIKDNWRSELYKYKVVQIE |
ANTI-HIV ANTIBODY N12-I2 FAB LIGHT CHAIN | L | 215 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | EIVMMQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPETFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
ANTI-HIV ANTIBODY N12-I2 FAB HEAVY CHAIN | H | 239 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | QVQLVQSGAEVKKPGSSVKVSCRASRGTFSSYGITWVRQAPGQGLEWMGGIIPIFDVTNYAQNFQGRVAITTDAEMSTAYMELRSLKSEDSAVYYCASDSRDFSYYEPGTSYSHYYNIMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH |
M48U1 CD4 MIMETIC PEPTIDE | N | 28 | Homo Sapiens , Human Immunodeficiency Virus 1 , Synthetic Construct | XNLHFCQLRCKSLGLLGRCAPTXCACVX |
Method: X-RAY DIFFRACTION
Deposited Date: 2020-03-11 Deposition Author(s): Gohain, N. , Pazgier, M. , Tolbert, W.D.