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FASTA Sequence PDB Format mmCIF Format
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6W1C

Human mabs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the mxr8 receptor binding domain

PDB DOI: 10.2210/pdb6w1c/pdb

Classification: VIRUS/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Mayaro Virus (Strain Brazil)

Deposited: 2020-03-04
Deposition Author(s): Kuhn, R.J. , Miller, A.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.3 Å

6w1c
Literature

Human mabs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the mxr8 receptor binding domain

Kuhn, R.J. , Miller, A.S.

Primary Citation of Related Structures: 6W1C


Proteins
Molecule Chains Sequence Length Organism Sequence
E1 glycoprotein A 380 Homo Sapiens , Mayaro Virus (Strain Brazil) YEHTAIIPNQVGFPYKAHVAREGYSPLTLQMQVIETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDHAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTPWTPFDTKILVYKGELYNQDFPRYGAGQPGRFGDIQSRTLDSRDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCIIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPVISELTCTVSTCTHSSDFGGIAVLSYKVEKSGRCDIHSHSNVAVLQEVSIETEGRSVIHFSTASASPSFVVSVCSSRATCTAKCEP
E1 glycoprotein B 380 Homo Sapiens , Mayaro Virus (Strain Brazil) YEHTAIIPNQVGFPYKAHVAREGYSPLTLQMQVIETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDHAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTPWTPFDTKILVYKGELYNQDFPRYGAGQPGRFGDIQSRTLDSRDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCIIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPVISELTCTVSTCTHSSDFGGIAVLSYKVEKSGRCDIHSHSNVAVLQEVSIETEGRSVIHFSTASASPSFVVSVCSSRATCTAKCEP
E1 glycoprotein C 380 Homo Sapiens , Mayaro Virus (Strain Brazil) YEHTAIIPNQVGFPYKAHVAREGYSPLTLQMQVIETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDHAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTPWTPFDTKILVYKGELYNQDFPRYGAGQPGRFGDIQSRTLDSRDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCIIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPVISELTCTVSTCTHSSDFGGIAVLSYKVEKSGRCDIHSHSNVAVLQEVSIETEGRSVIHFSTASASPSFVVSVCSSRATCTAKCEP
E1 glycoprotein D 380 Homo Sapiens , Mayaro Virus (Strain Brazil) YEHTAIIPNQVGFPYKAHVAREGYSPLTLQMQVIETSLEPTLNLEYITCDYKTKVPSPYVKCCGTAECRTQDKPEYKCAVFTGVYPFMWGGAYCFCDSENTQMSEAYVERADVCKHDHAAAYRAHTASLRAKIKVTYGTVNQTVEAYVNGDHAVTIAGTKFIFGPVSTPWTPFDTKILVYKGELYNQDFPRYGAGQPGRFGDIQSRTLDSRDLYANTGLKLARPAAGNIHVPYTQTPSGFKTWQKDRDSPLNAKAPFGCIIQTNPVRAMNCAVGNIPVSMDIADSAFTRLTDAPVISELTCTVSTCTHSSDFGGIAVLSYKVEKSGRCDIHSHSNVAVLQEVSIETEGRSVIHFSTASASPSFVVSVCSSRATCTAKCEP
E2 glycoprotein E 340 Homo Sapiens , Mayaro Virus (Strain Brazil) STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENIQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECTVTGTMGHFILAKCPPGERISVSFVDSKNEHRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVRYSSSCGSQAVGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRRMQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTFGAERVFDEQWITAQTEVTIPVPVEGVEYQWGNHKPQRFVVA
E2 glycoprotein F 340 Homo Sapiens , Mayaro Virus (Strain Brazil) STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENIQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECTVTGTMGHFILAKCPPGERISVSFVDSKNEHRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVRYSSSCGSQAVGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRRMQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTFGAERVFDEQWITAQTEVTIPVPVEGVEYQWGNHKPQRFVVA
E2 glycoprotein G 340 Homo Sapiens , Mayaro Virus (Strain Brazil) STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENIQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECTVTGTMGHFILAKCPPGERISVSFVDSKNEHRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVRYSSSCGSQAVGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRRMQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTFGAERVFDEQWITAQTEVTIPVPVEGVEYQWGNHKPQRFVVA
E2 glycoprotein H 340 Homo Sapiens , Mayaro Virus (Strain Brazil) STANHFNAYKLTRPYVAYCADCGMGHSCHSPAMIENIQADATDGTLKIQFASQIGLTKTDTHDHTKIRYAEGHDIAEAARSTLKVHSSSECTVTGTMGHFILAKCPPGERISVSFVDSKNEHRTCRIAYHHEQRLIGRERFTVRPHHGIELPCTTYQLTTAETSEEIDMHMPPDIPDRTILSQQSGNVKITVNGRTVRYSSSCGSQAVGTTTTDKTINSCTVDKCQAYVTSHTKWQFNSPFVPRRMQAERKGKVHIPFPLINTTCRVPLAPEALVRSGKREATLSLHPIHPTLLSYRTFGAERVFDEQWITAQTEVTIPVPVEGVEYQWGNHKPQRFVVA
Fab CHK-265 heavy chain I 218 Homo Sapiens , Mayaro Virus (Strain Brazil) QIQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYAEEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDYFISLDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIESRR
Fab CHK-265 heavy chain J 218 Homo Sapiens , Mayaro Virus (Strain Brazil) QIQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYAEEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDYFISLDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIESRR
Fab CHK-265 heavy chain K 218 Homo Sapiens , Mayaro Virus (Strain Brazil) QIQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYAEEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDYFISLDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIESRR
Fab CHK-265 heavy chain L 218 Homo Sapiens , Mayaro Virus (Strain Brazil) QIQLVQSGREVKNPGETVKISCKASGYTFTEYPMLWVKQAPGKGFRWMGLIYTNTGEPTYAEEFKGRFVFSLEISASTAYLQINNLTNEDTATYFCVRDYFISLDYWGQGTTLTVSSAKTTAPSVYPLAPVCGGTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIESRR
Fab CHK-265 light chain M 211 Homo Sapiens , Mayaro Virus (Strain Brazil) QAVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR
Fab CHK-265 light chain N 211 Homo Sapiens , Mayaro Virus (Strain Brazil) QAVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR
Fab CHK-265 light chain O 211 Homo Sapiens , Mayaro Virus (Strain Brazil) QAVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR
Fab CHK-265 light chain P 211 Homo Sapiens , Mayaro Virus (Strain Brazil) QAVVTQESALTTSPGETVTLTCRSNIGAVTSSNCANWVQEKPDHFFTGLIGDTNNRRSGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNLWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSR
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-03-04
Deposition Author(s): Kuhn, R.J. , Miller, A.S.