6W17
Structure of dip1-activated arp2/3 complex with nucleated actin filament
PDB DOI: 10.2210/pdb6w17/pdb
Classification: STRUCTURAL PROTEIN Organism(s): Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843)
Deposited: 2020-03-03 Deposition Author(s): Chowdhury, S. , Nolen, B.J. , Shaaban, M.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.9 Å
Structure of dip1-activated arp2/3 complex with nucleated actin filament
Chowdhury, S. , Nolen, B.J. , Shaaban, M.
Primary Citation of Related Structures: 6W17
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Actin-related protein 3 | A | 427 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARRYQIFGNSL |
| Phalloidin | M | 7 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | PAWXATC |
| Phalloidin | N | 7 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | PAWXATC |
| Phalloidin | O | 7 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | PAWXATC |
| Phalloidin | P | 7 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | PAWXATC |
| Phalloidin | Q | 7 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | PAWXATC |
| Actin-related protein 2 | B | 390 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLFQPHLVGSEQPGLSEFIFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVLHGDPARLPNFKVKIEDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEYGVRALDKLGPRTT |
| Actin-related protein 2/3 complex subunit 1 | C | 377 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MATSQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL |
| Actin-related protein 2/3 complex subunit 2 | D | 317 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MLSLDYNNIFIYELLTERFSSENPSSIDQVVTDFDGVTFHISTPEEKTKILISLSMKCYPELVNYGTLDLLKQIYGAYVHEPEMGYNFSILIDLQQLPATDEEKEQLAMSISMLKRNVLAAPFHRAFTKQAELADLARKDPENAPMLDKQATSQELMAIHYRDEETIVLWPEHDRVTVVFSTKFREETDRIFGKVFLQEFVDARRRPAIQTAPQVLFSYRDPPLEIRDIQGIQKGDDFGFVTFVLFERHFTPQNREDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVADFQKVLNRAKPDVELERKTATGRSFVRA |
| Actin-related protein 2/3 complex subunit 3 | E | 174 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MPAYHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIKGPADRTLIYGTLFISECLGRVNGLNYRDAERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMNKAL |
| Actin-related protein 2/3 complex subunit 4 | F | 168 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF |
| Actin-related protein 2/3 complex subunit 5 | G | 152 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MTFRTLDVDSITEPVLTEQDIFPIRNETAEQVQAAVSQLIPQARSAIQTGNALQGLKTLLSYVPYGNDVQEVRTQYLNAFVDVLSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANPQAYNSSVLLNWHEKVVEISGIGCIVRVLNSRPDL |
| Protein dip1 | H | 374 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MEFTDVFYNLENEKQFLAEIDELLTIPYEKNELEIGVSKFLSFINKYGEPYLITEFQLQRCMEKFLNSPLYQLDENAVLSIFYDCFFFLKEQQTLKFIIIVFQSEIQENEYCLRLLASTGFIPVLIKAMKQFKDRSENVAFTSFRYALFLVYYICRSRRLSPTDLVAIDEYFLVNLFKTSEEAWNDEDMDSFGMCVLTLLSINEQFMLVRLASKGSFEIANGIMDLLSSSKVDNGIYSEGLVFTLNREKDPRSRMLILKQLFLLFTTPATYEIFYTNDLNVLIDIFIREINNIPDELSDLRYAYLQVLIPLLENTQVRHPPHYKTKCIVDAVNNVLISHSKSSNMEDARTTDVAIRVLEVPWLQQEMKSLGTAQ |
| Actin, alpha skeletal muscle | I | 377 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF |
| Actin, alpha skeletal muscle | J | 377 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF |
| Actin, alpha skeletal muscle | K | 377 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF |
| Actin, alpha skeletal muscle | L | 377 | Amanita Phalloides , Oryctolagus Cuniculus , Schizosaccharomyces Pombe (Strain 972 / Atcc 24843) | MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2020-03-03 Deposition Author(s): Chowdhury, S. , Nolen, B.J. , Shaaban, M.