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FASTA Sequence PDB Format mmCIF Format
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6VY2

Cryo-em structure of m1214_n1 fab in complex with ch505 tf chimeric sosip.664 env trimer

PDB DOI: 10.2210/pdb6vy2/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2020-02-25
Deposition Author(s): Chan, K.-W. , Kong, X.P.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.86 Å

6vy2
Literature

Cryo-em structure of m1214_n1 fab in complex with ch505 tf chimeric sosip.664 env trimer

Chan, K.-W. , Kong, X.P.

Primary Citation of Related Structures: 6VY2


Proteins
Molecule Chains Sequence Length Organism Sequence
Glycoprotein 120 A 487 Homo Sapiens , Human Immunodeficiency Virus 1 MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVLKNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNALFYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINESKWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIHCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRCKRRVV
Glycoprotein 120 C 487 Homo Sapiens , Human Immunodeficiency Virus 1 MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVLKNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNALFYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINESKWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIHCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRCKRRVV
Glycoprotein 120 E 487 Homo Sapiens , Human Immunodeficiency Virus 1 MPMGSLQPLATLYLLGMLVASVLAAENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKKVHNVWATHACVPTDPNPQEMVLKNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTNATASNSSIIEGMKNCSFNITTELRDKREKKNALFYKLDIVQLDGNSSQYRLINCNTSVITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFTGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENITNNVKTIIVHLNESVKIECTRPNNKTRTSIRIGPGQWFYATGQVIGDIREAYCNINESKWNETLQRVSKKLKEYFPHKNITFQPSSGGDLEITTHSFNCGGEFFYCNTSSLFNRTYMANSTDMANSTETNSTRTITIHCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLTRDGGKNNTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRCKRRVV
Glycoprotein 41 B 160 Homo Sapiens , Human Immunodeficiency Virus 1 GRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Glycoprotein 41 D 160 Homo Sapiens , Human Immunodeficiency Virus 1 GRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Glycoprotein 41 F 160 Homo Sapiens , Human Immunodeficiency Virus 1 GRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
M1214 N1 Fab heavy chain H 226 Homo Sapiens , Human Immunodeficiency Virus 1 DRLFQSGGGVSRPGGSLRVNCGASGFTVRTHYMYWLRQSPGKGLEWVAFMNSGGSVSYVDSVRGRFSVSRDNPANAMVLQMDALKIEDTGTYYCARELREAWYGDLRDYSGLDVWGRGTIVSISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
M1214 N1 Fab heavy chain I 226 Homo Sapiens , Human Immunodeficiency Virus 1 DRLFQSGGGVSRPGGSLRVNCGASGFTVRTHYMYWLRQSPGKGLEWVAFMNSGGSVSYVDSVRGRFSVSRDNPANAMVLQMDALKIEDTGTYYCARELREAWYGDLRDYSGLDVWGRGTIVSISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
M1214 N1 Fab heavy chain J 226 Homo Sapiens , Human Immunodeficiency Virus 1 DRLFQSGGGVSRPGGSLRVNCGASGFTVRTHYMYWLRQSPGKGLEWVAFMNSGGSVSYVDSVRGRFSVSRDNPANAMVLQMDALKIEDTGTYYCARELREAWYGDLRDYSGLDVWGRGTIVSISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
M1214 N1 Fab light chain L 214 Homo Sapiens , Human Immunodeficiency Virus 1 QSALAQPPSVSGSPGQSVTITCTGINDYGAAYKFVSWYQQHPGKEPRLIMKNVKDRWSVTPNRFSGSTSGNTASLTISNLQSDDEAQYFCAVYAGGFTFPRLGGGTKLSVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
M1214 N1 Fab light chain M 214 Homo Sapiens , Human Immunodeficiency Virus 1 QSALAQPPSVSGSPGQSVTITCTGINDYGAAYKFVSWYQQHPGKEPRLIMKNVKDRWSVTPNRFSGSTSGNTASLTISNLQSDDEAQYFCAVYAGGFTFPRLGGGTKLSVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
M1214 N1 Fab light chain N 214 Homo Sapiens , Human Immunodeficiency Virus 1 QSALAQPPSVSGSPGQSVTITCTGINDYGAAYKFVSWYQQHPGKEPRLIMKNVKDRWSVTPNRFSGSTSGNTASLTISNLQSDDEAQYFCAVYAGGFTFPRLGGGTKLSVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-25
Deposition Author(s): Chan, K.-W. , Kong, X.P.