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FASTA Sequence PDB Format mmCIF Format
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6VX4

Density-fitted model structure of antibody variable domains of tytx11 in complex with typhoid toxin

PDB DOI: 10.2210/pdb6vx4/pdb

Classification: TOXIN
Organism(s): Enterobacter Aerogenes , Pyrobaculum Spherical Virus

Deposited: 2020-02-21
Deposition Author(s): Nguyen, T. , Song, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.12 Å

6vx4
Literature

Density-fitted model structure of antibody variable domains of tytx11 in complex with typhoid toxin

Nguyen, T. , Song, J.

Primary Citation of Related Structures: 6VX4


Proteins
Molecule Chains Sequence Length Organism Sequence
Variable Domain of Kappa Chain of TyTx11 Antibody K 106 Enterobacter Aerogenes , Pyrobaculum Spherical Virus DIQMTQSSSYLSVSQGDRVTITCKASDHIDNWLAWYQQKPGNAPRLLISGATSLKTGLPSRFSGSGSGKDFSLSITNLQTEDVASYYCQQYWRTPYTFGGGTKLEI
Pertussis like toxin subunit B C 114 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B A 114 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B B 114 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B D 114 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B E 114 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Variable Domain of Heavy Chain of Antibody TyTx11 H 181 Enterobacter Aerogenes , Pyrobaculum Spherical Virus EVQLQQSGPVLVKPGPSVKISCKASGYSFIDYFMNWVMQSHGKSLEWIGRIDPYSGDTFYNQKFKGKATLTVDKSSTTAHMELRSLASEDSAVYYCAREVLNYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSPWYISFLKLNKIFXREX
Pertussis toxin-like subunit ArtA G 224 Enterobacter Aerogenes , Pyrobaculum Spherical Virus VDFVYRVDSTPPDVIFRDGFSLLGYNRNFQQFISGRSCSGGSSDSRYIATTSSVNQTYAIARAYYSRSTFKGNLYRYQIRADNNFYSLLPSITYLETQGGHFNAYEKTMMRLQREYVSTLSILPENIQKAVALVYDSATGLVKDGVSTMNASYLGLSTTSNPGVIPFLPEPQTYTQQRIDAFGPLISSCFSIGSVCHSHRGQRADVYNMSFYDARPVIELILSK
Cytolethal distending toxin subunit B F 255 Enterobacter Aerogenes , Pyrobaculum Spherical Virus NISDYKVMTWNLQGSSASTESKWNVNVRQLLSGTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYHSAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAAAIVRVTINFFRQPQMRHLSWFLAGDFNRSPDRLENDLMTEHLERVVAVLAPTEPTQIGGGILDYGVIVDRAPYSQRVEALRNPQLASDHYPVAFLARSCLEHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-21
Deposition Author(s): Nguyen, T. , Song, J.