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6VX4

Density-fitted model structure of antibody variable domains of tytx11 in complex with typhoid toxin

PDB DOI: 10.2210/pdb6vx4/pdb

Classification: TOXIN
Organism(s): Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18

Deposited: 2020-02-21
Deposition Author(s): Nguyen, T. , Song, J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.12 Å

Literature

Density-fitted model structure of antibody variable domains of tytx11 in complex with typhoid toxin

Nguyen, T. , Song, J.

Primary Citation of Related Structures: 6VX4


Proteins
Molecule Chains Sequence Length Organism Sequence
Variable Domain of Kappa Chain of TyTx11 Antibody K 106 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 DIQMTQSSSYLSVSQGDRVTITCKASDHIDNWLAWYQQKPGNAPRLLISGATSLKTGLPSRFSGSGSGKDFSLSITNLQTEDVASYYCQQYWRTPYTFGGGTKLEI
Pertussis like toxin subunit B C 114 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B A 114 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B B 114 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B D 114 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Pertussis like toxin subunit B E 114 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EWTGDNTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
Variable Domain of Heavy Chain of Antibody TyTx11 H 181 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 EVQLQQSGPVLVKPGPSVKISCKASGYSFIDYFMNWVMQSHGKSLEWIGRIDPYSGDTFYNQKFKGKATLTVDKSSTTAHMELRSLASEDSAVYYCAREVLNYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSPWYISFLKLNKIFXREX
Pertussis toxin-like subunit ArtA G 224 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 VDFVYRVDSTPPDVIFRDGFSLLGYNRNFQQFISGRSCSGGSSDSRYIATTSSVNQTYAIARAYYSRSTFKGNLYRYQIRADNNFYSLLPSITYLETQGGHFNAYEKTMMRLQREYVSTLSILPENIQKAVALVYDSATGLVKDGVSTMNASYLGLSTTSNPGVIPFLPEPQTYTQQRIDAFGPLISSCFSIGSVCHSHRGQRADVYNMSFYDARPVIELILSK
Cytolethal distending toxin subunit B F 255 Mus Musculus , Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 NISDYKVMTWNLQGSSASTESKWNVNVRQLLSGTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYHSAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAAAIVRVTINFFRQPQMRHLSWFLAGDFNRSPDRLENDLMTEHLERVVAVLAPTEPTQIGGGILDYGVIVDRAPYSQRVEALRNPQLASDHYPVAFLARSCLEHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-21
Deposition Author(s): Nguyen, T. , Song, J.