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6VTX

Crystal structure of human klf4 zinc finger dna binding domain in complex with nanog dna

PDB DOI: 10.2210/pdb6vtx/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2020-02-13
Deposition Author(s): Choi, K.J. , Ferreon, A.C.M. , Ferreon, J.C. , Kim, C. , Mackenzie, K.R. , Sankaran, B. , Sharma, R. , Sharma, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.14 Å

Literature

Crystal structure of human klf4 zinc finger dna binding domain in complex with nanog dna

Choi, K.J. , Ferreon, A.C.M. , Ferreon, J.C. , Kim, C. , Mackenzie, K.R. , Sankaran, B. , Sharma, R. , Sharma, S.

Primary Citation of Related Structures: 6VTX


Proteins
Molecule Chains Sequence Length Organism Sequence
Krueppel-like factor 4 A 84 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*GP*GP*GP*GP*GP*TP*GP*TP*GP*CP*C)-3') b 12 NA AGGGGGTGTGCC
DNA (5'-D(*GP*GP*CP*AP*CP*AP*CP*CP*CP*CP*CP*T)-3') c 12 NA GGCACACCCCCT
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2020-02-13
Deposition Author(s): Choi, K.J. , Ferreon, A.C.M. , Ferreon, J.C. , Kim, C. , Mackenzie, K.R. , Sankaran, B. , Sharma, R. , Sharma, S.