PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6VPV

Trimeric photosystem i from the high-light tolerant cyanobacteria cyanobacterium aponinum

PDB DOI: 10.2210/pdb6vpv/pdb

Classification: PHOTOSYNTHESIS
Organism(s): Cyanobacterium Aponinum 0216

Deposited: 2020-02-04
Deposition Author(s): Dobson, Z. , Fromme, P. , Lin, S. , Mazor, Y. , Toporik, H. , Vaughn, N. , Williams, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

6vpv
Literature

Trimeric photosystem i from the high-light tolerant cyanobacteria cyanobacterium aponinum

Dobson, Z. , Fromme, P. , Lin, S. , Mazor, Y. , Toporik, H. , Vaughn, N. , Williams, D.

Primary Citation of Related Structures: 6VPV


Proteins
Molecule Chains Sequence Length Organism Sequence
Photosystem I P700 chlorophyll a apoprotein A1 A 741 Cyanobacterium Aponinum 0216 KAKVIVDKDPVPTSFEKWGKPGHFDRTLARGPKTTTWIWNLHADAHDFDSQTSDLEDISRKIFSAHFGHLAVVFVWLSGMYFHGAKFSNYSAWLADPLNIKPSAQVVWPVVGQDILNADVGGGFHGIQITSGFFQLWRASGITNEYQLYCTAIGGLVMAGLMLFAGWFHYHKAAPKLEWFQNVESMMNHHLAGLLGLGSLGWAGHQIHVSLPINKLLDAGVAPNEIPLPHEFILDPAKMAELYPSFAQGLTPFFTLNWGVYSDFLTFKGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHNMKEILEGHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGSLTIIVAQHMYAMPPYPYLATDYGTQLSIFTHHMWIGGFLIVGAGAHASIFMVRDYDPAKNVNNLLDRVLRHRDAIISHLNWVCIWLGFHSFGLYIHNDTMRALGRPQDMFSDSAIQLQPVFAQWIQGLHAAAAGATAPFASAGVSPVFGGEVVAVGGKVAMMPITLGTADFMVHHIHAFTIHVTVLILLKGVLYSRSSRLIPDKAELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVLPDGSVSHITGGNFAQSAITINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLKLAPAIQPRALSIVQGRAVGVAHYLLGGIVTTWAFFLCRILSVG
Photosystem I P700 chlorophyll a apoprotein A1 1 741 Cyanobacterium Aponinum 0216 KAKVIVDKDPVPTSFEKWGKPGHFDRTLARGPKTTTWIWNLHADAHDFDSQTSDLEDISRKIFSAHFGHLAVVFVWLSGMYFHGAKFSNYSAWLADPLNIKPSAQVVWPVVGQDILNADVGGGFHGIQITSGFFQLWRASGITNEYQLYCTAIGGLVMAGLMLFAGWFHYHKAAPKLEWFQNVESMMNHHLAGLLGLGSLGWAGHQIHVSLPINKLLDAGVAPNEIPLPHEFILDPAKMAELYPSFAQGLTPFFTLNWGVYSDFLTFKGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHNMKEILEGHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGSLTIIVAQHMYAMPPYPYLATDYGTQLSIFTHHMWIGGFLIVGAGAHASIFMVRDYDPAKNVNNLLDRVLRHRDAIISHLNWVCIWLGFHSFGLYIHNDTMRALGRPQDMFSDSAIQLQPVFAQWIQGLHAAAAGATAPFASAGVSPVFGGEVVAVGGKVAMMPITLGTADFMVHHIHAFTIHVTVLILLKGVLYSRSSRLIPDKAELGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVLPDGSVSHITGGNFAQSAITINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLKLAPAIQPRALSIVQGRAVGVAHYLLGGIVTTWAFFLCRILSVG
Photosystem I reaction center subunit XI L 160 Cyanobacterium Aponinum 0216 IDVVNHGGDPQVGNLSTPINGSAFTKAFINALPAYRKGLSPNRRGLEVGMAHGYLLYGPFAVLGPLRLTEYGPTAGLLATIGLVSILTICLSIYGAVGVSKPTETLTTPEVPMDLATKEGWSEFAGGFLLGGCGGAFFAFFLCQTPHLQPLIEVASNIWS
Photosystem I reaction center subunit XI 0 160 Cyanobacterium Aponinum 0216 IDVVNHGGDPQVGNLSTPINGSAFTKAFINALPAYRKGLSPNRRGLEVGMAHGYLLYGPFAVLGPLRLTEYGPTAGLLATIGLVSILTICLSIYGAVGVSKPTETLTTPEVPMDLATKEGWSEFAGGFLLGGCGGAFFAFFLCQTPHLQPLIEVASNIWS
Photosystem I reaction center subunit XII M 30 Cyanobacterium Aponinum 0216 SISETQVFVALVIALIPGILAFRLATELYK
Photosystem I reaction center subunit XII Z 30 Cyanobacterium Aponinum 0216 SISETQVFVALVIALIPGILAFRLATELYK
Photosystem I P700 chlorophyll a apoprotein A2 B 737 Cyanobacterium Aponinum 0216 ATKFPKFSQDLAQDPTTRRIWYGIATAHDFETHDGMTEENLYQKIFASHFGHLAIIFLWTSGTVFHVAWQGNFEQWIKDPLNVRPIAHAIWDPHFGQGAVDAFTQAGASSPVNVAYSGVYHWFYTIGMTNNQDLYQGAVFLLILSALFLFAGWLHLQPKFRPSLSWFKNAESRLNHHLAGLFGVSSLAWTGHLVHVAIPESRGVHVGWDNFLSVKPHPAGLAPFFTGNWGVYAQNPDTASHVFGTSEGAGSAILTFLGGFHPQTESLWLTDIAHHHLAIAVIFIVAGHMYRTNWGIGHSIKDILAAHNPPQGTPFGGALGAGHRGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPSYAFIAKDYTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFVQAASGKALYGFDALLSNPDSVASTASAVWLPGWLDAINSGTNSLFLNIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGFSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTLGWLTFYWHWKHLGIWTGNVAQFNENSTYLMGWFRDYLWANSAQLINGYNPYGVNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETIVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFTVGYILTYAAFLIASTAGKFG
Photosystem I P700 chlorophyll a apoprotein A2 2 737 Cyanobacterium Aponinum 0216 ATKFPKFSQDLAQDPTTRRIWYGIATAHDFETHDGMTEENLYQKIFASHFGHLAIIFLWTSGTVFHVAWQGNFEQWIKDPLNVRPIAHAIWDPHFGQGAVDAFTQAGASSPVNVAYSGVYHWFYTIGMTNNQDLYQGAVFLLILSALFLFAGWLHLQPKFRPSLSWFKNAESRLNHHLAGLFGVSSLAWTGHLVHVAIPESRGVHVGWDNFLSVKPHPAGLAPFFTGNWGVYAQNPDTASHVFGTSEGAGSAILTFLGGFHPQTESLWLTDIAHHHLAIAVIFIVAGHMYRTNWGIGHSIKDILAAHNPPQGTPFGGALGAGHRGLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPSYAFIAKDYTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEANKDNVLARMLEHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFVQAASGKALYGFDALLSNPDSVASTASAVWLPGWLDAINSGTNSLFLNIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGFSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTLGWLTFYWHWKHLGIWTGNVAQFNENSTYLMGWFRDYLWANSAQLINGYNPYGVNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETIVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFTVGYILTYAAFLIASTAGKFG
Photosystem I iron-sulfur center C 80 Cyanobacterium Aponinum 0216 SHSVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY
Photosystem I iron-sulfur center 3 80 Cyanobacterium Aponinum 0216 SHSVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY
Photosystem I reaction center subunit II D 139 Cyanobacterium Aponinum 0216 IQLTGTMPKFGGSTGGLLSAADREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYFARKEQCLALGTQLRTKFKPKIEDYKIYRIYPTGETQYLHPADGVFPEKVNEGREFHGKKDRNIGKNPEPVTLKFSGKTPYD
Photosystem I reaction center subunit II 4 139 Cyanobacterium Aponinum 0216 IQLTGTMPKFGGSTGGLLSAADREEKYAITWTSKTEQVFEMPTGGAAIMNEGENLLYFARKEQCLALGTQLRTKFKPKIEDYKIYRIYPTGETQYLHPADGVFPEKVNEGREFHGKKDRNIGKNPEPVTLKFSGKTPYD
Photosystem I reaction center subunit IV E 68 Cyanobacterium Aponinum 0216 AIQRGSKVRILRKESYWYKDVGTVASVDKSGILYPVIVRFDKVNYNGFSGSATGVNTNNFAEHELEEV
Photosystem I reaction center subunit IV 5 68 Cyanobacterium Aponinum 0216 AIQRGSKVRILRKESYWYKDVGTVASVDKSGILYPVIVRFDKVNYNGFSGSATGVNTNNFAEHELEEV
PSI-F F 141 Cyanobacterium Aponinum 0216 DLSHLTPCSESPAYQAKAKSFRNTTSDPESGQKRAESYAEALCGPEGYPHLVVDGRLDHAGDFIIPGLLFLYVAGWIGWVGRSYLIAIREEKDTEMKEIIIDVPLAINKMLFGFMWPLQAFGEFTSGKLTVKDSEIPVSPR
PSI-F 6 141 Cyanobacterium Aponinum 0216 DLSHLTPCSESPAYQAKAKSFRNTTSDPESGQKRAESYAEALCGPEGYPHLVVDGRLDHAGDFIIPGLLFLYVAGWIGWVGRSYLIAIREEKDTEMKEIIIDVPLAINKMLFGFMWPLQAFGEFTSGKLTVKDSEIPVSPR
Photosystem I reaction center subunit VIII I 38 Cyanobacterium Aponinum 0216 ILGDFAASFLPAILVPAVGLVMPAVVMGLLFLQIESEA
Photosystem I reaction center subunit VIII 7 38 Cyanobacterium Aponinum 0216 ILGDFAASFLPAILVPAVGLVMPAVVMGLLFLQIESEA
Photosystem I reaction center subunit IX J 39 Cyanobacterium Aponinum 0216 KGLTTFLSTAPVLITALLVFTAGLLIEFNRFYPDLLFHP
Photosystem I reaction center subunit IX 8 39 Cyanobacterium Aponinum 0216 KGLTTFLSTAPVLITALLVFTAGLLIEFNRFYPDLLFHP
Photosystem I reaction center subunit PsaK K 78 Cyanobacterium Aponinum 0216 AVPTTLEWNLNVGLTMIVCNIVAIAFAKYTMKEPGAGPKLPGEAFFGGMGLPALLATTSFGHLLGAGVILGLASLGAL
Photosystem I reaction center subunit PsaK 9 78 Cyanobacterium Aponinum 0216 AVPTTLEWNLNVGLTMIVCNIVAIAFAKYTMKEPGAGPKLPGEAFFGGMGLPALLATTSFGHLLGAGVILGLASLGAL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2020-02-04
Deposition Author(s): Dobson, Z. , Fromme, P. , Lin, S. , Mazor, Y. , Toporik, H. , Vaughn, N. , Williams, D.