PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6VBQ

Crystal structure of anti-hiv-1 antibody dh822 bound to gp120 v2 peptide

PDB DOI: 10.2210/pdb6vbq/pdb

Classification: IMMUNE SYSTEM/Viral Protein
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2019-12-19
Deposition Author(s): Janus, B.M. , Ofek, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.116 Å

Literature

Crystal structure of anti-hiv-1 antibody dh822 bound to gp120 v2 peptide

Janus, B.M. , Ofek, G.

Primary Citation of Related Structures: 6VBQ


Proteins
Molecule Chains Sequence Length Organism Sequence
DH822 heavy chain H 230 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGASVKLSCKASGYTFTDYYIHWVRQAPGQGLEWMGIINPRRDTTTYAQKFQGRVTMTRDTSTNTVYMELSSLRSDDTAVYFCAKNVGFCNSDSCYVGMDVWGPGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH822 heavy chain A 230 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGASVKLSCKASGYTFTDYYIHWVRQAPGQGLEWMGIINPRRDTTTYAQKFQGRVTMTRDTSTNTVYMELSSLRSDDTAVYFCAKNVGFCNSDSCYVGMDVWGPGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH822 heavy chain E 230 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGASVKLSCKASGYTFTDYYIHWVRQAPGQGLEWMGIINPRRDTTTYAQKFQGRVTMTRDTSTNTVYMELSSLRSDDTAVYFCAKNVGFCNSDSCYVGMDVWGPGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH822 heavy chain C 230 Homo Sapiens , Synthetic Construct QVQLVQSGAEVKKPGASVKLSCKASGYTFTDYYIHWVRQAPGQGLEWMGIINPRRDTTTYAQKFQGRVTMTRDTSTNTVYMELSSLRSDDTAVYFCAKNVGFCNSDSCYVGMDVWGPGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH822 light chain L 214 Homo Sapiens , Synthetic Construct SYELTQPPSMSVSPGQTARITCSADVLPKQYAYWYQQKPGQAPLLLIYKDTERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSDIYLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DH822 light chain B 214 Homo Sapiens , Synthetic Construct SYELTQPPSMSVSPGQTARITCSADVLPKQYAYWYQQKPGQAPLLLIYKDTERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSDIYLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DH822 light chain F 214 Homo Sapiens , Synthetic Construct SYELTQPPSMSVSPGQTARITCSADVLPKQYAYWYQQKPGQAPLLLIYKDTERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSDIYLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DH822 light chain D 214 Homo Sapiens , Synthetic Construct SYELTQPPSMSVSPGQTARITCSADVLPKQYAYWYQQKPGQAPLLLIYKDTERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSTDSSDIYLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Envelope glycoprotein gp160 J 22 Homo Sapiens , Synthetic Construct LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 P 22 Homo Sapiens , Synthetic Construct LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 I 22 Homo Sapiens , Synthetic Construct LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 K 22 Homo Sapiens , Synthetic Construct LRDKKQKVHALFYKLDIVPIED
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-12-19
Deposition Author(s): Janus, B.M. , Ofek, G.