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6VBP

Crystal structure of anti-hiv-1 antibody dh815 bound to gp120 v2 peptide

PDB DOI: 10.2210/pdb6vbp/pdb

Classification: IMMUNE SYSTEM/Viral Protein
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-12-19
Deposition Author(s): Janus, B.M. , Ofek, G.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.298 Å

Literature

Crystal structure of anti-hiv-1 antibody dh815 bound to gp120 v2 peptide

Janus, B.M. , Ofek, G.

Primary Citation of Related Structures: 6VBP


Proteins
Molecule Chains Sequence Length Organism Sequence
DH815 light chain L 220 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DIVMTQSPDSLAVSLGERATINCKSSQSVFHSSNNKNYLAWYQQKPGQSPKLLIHWASARESGVPERISGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DH815 light chain B 220 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DIVMTQSPDSLAVSLGERATINCKSSQSVFHSSNNKNYLAWYQQKPGQSPKLLIHWASARESGVPERISGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DH815 light chain D 220 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DIVMTQSPDSLAVSLGERATINCKSSQSVFHSSNNKNYLAWYQQKPGQSPKLLIHWASARESGVPERISGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DH815 light chain I 220 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DIVMTQSPDSLAVSLGERATINCKSSQSVFHSSNNKNYLAWYQQKPGQSPKLLIHWASARESGVPERISGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DH815 heavy chain H 223 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EVQLVQSGAEVKKPGESLRISCKGSGYNFTNYWIGWVRQVPGKGPEWMGLIYPSDSDTRYNPSLQGHVTISADKSLTTAYLRWSSLRASDSATYYCVTSGIYGYLDYWGRGTQVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH815 heavy chain A 223 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EVQLVQSGAEVKKPGESLRISCKGSGYNFTNYWIGWVRQVPGKGPEWMGLIYPSDSDTRYNPSLQGHVTISADKSLTTAYLRWSSLRASDSATYYCVTSGIYGYLDYWGRGTQVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH815 heavy chain C 223 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EVQLVQSGAEVKKPGESLRISCKGSGYNFTNYWIGWVRQVPGKGPEWMGLIYPSDSDTRYNPSLQGHVTISADKSLTTAYLRWSSLRASDSATYYCVTSGIYGYLDYWGRGTQVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DH815 heavy chain J 223 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) EVQLVQSGAEVKKPGESLRISCKGSGYNFTNYWIGWVRQVPGKGPEWMGLIYPSDSDTRYNPSLQGHVTISADKSLTTAYLRWSSLRASDSATYYCVTSGIYGYLDYWGRGTQVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
Envelope glycoprotein gp160 F 22 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 E 22 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 G 22 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LRDKKQKVHALFYKLDIVPIED
Envelope glycoprotein gp160 K 22 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LRDKKQKVHALFYKLDIVPIED
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-12-19
Deposition Author(s): Janus, B.M. , Ofek, G.