6V8W
Cdyl2 chromodomain in complex with a synthetic peptide
PDB DOI: 10.2210/pdb6v8w/pdb
Classification: PROTEIN BINDING Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2019-12-12 Deposition Author(s): Arrowsmith, C.H. , Bountra, C. , Dong, C. , Edwards, A.M. , James, L.I. , Lamb, K.N. , Min, J. , Structural Genomics Consortium , Structural Genomics Consortium (Sgc) , Tempel, W.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.8 Å
Cdyl2 chromodomain in complex with a synthetic peptide
Arrowsmith, C.H. , Bountra, C. , Dong, C. , Edwards, A.M. , James, L.I. , Lamb, K.N. , Min, J. , Structural Genomics Consortium , Structural Genomics Consortium (Sgc) , Tempel, W.
Primary Citation of Related Structures: 6V8W
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Chromodomain Y-like protein 2 | A | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | B | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | C | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | D | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | E | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | F | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | G | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | H | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | I | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | J | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | K | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | L | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | M | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | N | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | O | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | P | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | Q | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | R | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | S | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | T | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | U | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | V | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | W | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | X | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | Y | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| Chromodomain Y-like protein 2 | Z | 62 | Homo Sapiens , Synthetic Construct | GASGDLYEVERIVDKRKNKKGKWEYLIRWKGYGSTEDTWEPEHHLLHCEEFIDEFNGLHMSK |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | AA | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | BB | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | CC | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | DD | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | EE | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | FF | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | GG | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | HH | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | II | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | JJ | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | KK | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | LL | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | MM | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | NN | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | OO | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | PP | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX | |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | RR | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | SS | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | TT | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | UU | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | VV | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | WW | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | XX | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | YY | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
| IVA-PHE-ALA-PHE-5T3-SER-NH2 | ZZ | 7 | Homo Sapiens , Synthetic Construct | XFAFXSX |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-12-12 Deposition Author(s): Arrowsmith, C.H. , Bountra, C. , Dong, C. , Edwards, A.M. , James, L.I. , Lamb, K.N. , Min, J. , Structural Genomics Consortium , Structural Genomics Consortium (Sgc) , Tempel, W.