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FASTA Sequence PDB Format mmCIF Format
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6V86

Parainfluenza virus 5 l-p complex with an alternate conformation of the cd-mtase-ctd module

PDB DOI: 10.2210/pdb6v86/pdb

Classification: VIRAL PROTEIN
Organism(s): Simian Virus 5 (Strain W3)

Deposited: 2019-12-10
Deposition Author(s): Abdella, R. , He, Y.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.63 Å

6v86
Literature

Parainfluenza virus 5 l-p complex with an alternate conformation of the cd-mtase-ctd module

Abdella, R. , He, Y.

Primary Citation of Related Structures: 6V86


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-directed RNA polymerase L A 2255 Simian Virus 5 (Strain W3) MAGSREILLPEVHLNSPIVKHKLYYYILLGNLPNEIDLDDLGPLHNQNWNQIAHEESNLAQRLVNVRNFLITHIPDLRKGHWQEYVNVILWPRILPLIPDFKINDQLPLLKNWDKLVKESCSVINAGTSQCIQNLSYGLTGRGNLFTRSRELSGDRRDIDLKTVVAAWHDSDWKRISDFWIMIKFQMRQLIVRQTDHNDSDLITYIENREGIIIITPELVALFNTENHTLTYMTFEIVLMVSDMYEGRHNILSLCTVSTYLNPLKKRITYLLSLVDNLAFQIGDAVYNIIALLESFVYAQLQMSDPIPELRGQFHAFVCSEILDALRGTNSFTQDELRTVTTNLISPFQDLTPDLTAELLCIMRLWGHPMLTASQAAGKVRESMCAGKVLDFPTIMKTLAFFHTILINGYRRKHHGVWPPLNLPGNASKGLTELMNDNTEISYEFTLKHWKEVSLIKFKKCFDADAGEELSIFMKDKAISAPKQDWMSVFRRSLIKQRHQHHQVPLPNPFNRRLLLNFLGDDKFDPNVELQYVTSGEYLHDDTFCASYSLKEKEIKPDGRIFAKLTKRMRSCQVIAESLLANHAGKLMKENGVVMNQLSLTKSLLTMSQIGIISEKARKSTRDNINQPGFQNIQRNKSHHSKQVNQRDPSDDFELAASFLTTDLKKYCLQWRYQTIIPFAQSLNRMYGYPHLFEWIHLRLMRSTLYVGDPFNPPADTSQFDLDKVINGDIFIVSPRGGIEGLCQKAWTMISIAVIILSATESGTRVMSMVQGDNQAIAVTTRVPRSLPTLEKKTIAFRSCNLFFERLKCNNFGLGHHLKEQETIISSHFFVYSKRIFYQGRILTQALKNASKLCLTADVLGECTQSSCSNLATTVMRLTENGVEKDICFYLNIYMTIKQLSYDIIFPQVSIPGDQITLEYINNPHLVSRLALLPSQLGGLNYLSCSRLFNRNIGDPVVSAVADLKRLIKSGCMDYWILYNLLGRKPGNGSWATLAADPYSINIEYQYPPTTALKRHTQQALMELSTNPMLRGIFSDNAQAEENNLARFLLDREVIFPRVAHIIIEQTSVGRRKQIQGYLDSTRSIMRKSLEIKPLSNRKLNEILDYNINYLAYNLALLKNAIEPPTYLKAMTLETCSIDIARNLRKLSWAPLLGGRNLEGLETPDPIEITAGALIVGSGYCEQCAAGDNRFTWFFLPSGIEIGGDPRDNPPIRVPYIGSRTDERRVASMAYIRGASSSLKAVLRLAGVYIWAFGDTLENWIDALDLSHTRVNITLEQLQSLTPLPTSANLTHRLDDGTTTLKFTPASSYTFSSFTHISNDEQYLTINDKTADSNIIYQQLMITGLGILETWNNPPINRTFEESTLHLHTGASCCVRPVDSCILSEALTVKPHITVPYSNKFVFDEDPLSEYETAKLESLSFQAQLGNIDAVDMTGKLTLLSQFTARQIINAITGLDESVSLTNDAIVASDYVSNWISECMYTKLDELFMYCGWELLLELSYQMYYLRVVGWSNIVDYSYMILRRIPGAALNNLASTLSHPKLFRRAINLDIVAPLNAPHFASLDYIKMSVDAILWGCKRVINVLSNGGDLELVVTSEDSLILSDRSMNLIARKLTLLSLIHHNGLELPKIKGFSPDEKCFALTEFLRKVVNSGLSSIENLSNFMYNVENPRLAAFASNNYYLTRKLLNSIRDTESGQVAVTSYYESLEYIDSLKLTPHVPGTSCIEDDSLCTNDYIIWIIESNANLEKYPIPNSPEDDSNFHNFKLNAPSHHTLRPLGLSSTAWYKGISCCRYLERLKLPQGDHLYIAEGSGASMTIIEYLFPGRKIYYNSLFSSGDNPPQRNYAPMPTQFIESVPYKLWQAHTDQYPEIFEDFIPLWNGNAAMTDIGMTACVEFIINRVGPRTCSLVHVDLESSASLNQQCLSKPIINAIITATTVLCPHGVLILKYSWLPFTRFSTLITFLWCYFERITVLRSTYSDPANHEVYLICILANNFAFQTVSQATGMAMTLTDQGFTLISPERINQYWDGHLKQERIVAEAIDKVVLGENALFNSSDNELILKCGGTPNARNLIDIEPVATFIEFEQLICTMLTTHLKEIIDITRSGTQDYESLLLTPYNLGLLGKISTIVRLLTERILNHTIRNWLILPPSLRMIVKQDLEFGIFRITSILNSDRFLKLSPNRKYLIAQLTAGYIRKLIEGDCNIDLTRPIQKQIWKALGCVVYCHDPMDQRESTEFIDININEEIDRGIDGEEI
Phosphoprotein B 392 Simian Virus 5 (Strain W3) MDPTDLSFSPDEINKLIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPIATSSPIDFKRGAGIPAGSIEGSTQSDGWEMKSRSLSGAIHPVLQSPLQQGDLNALVTSVQSLALNVNEILNTVRNLDSRMNQLETKVDRILSSQSLIQTIKNDIVGLKAGMATLEGMITTVKIMDPGVPSNVTVEDVRKTLSNHAVVVPESFNDSFLTQSEDVISLDELARPTATSVKKIVRKVPPQKDLTGLKITLEQLAKDCISKPKMREEYLLKINQASSEAQLIDLKKAIIRSAI
Phosphoprotein C 392 Simian Virus 5 (Strain W3) MDPTDLSFSPDEINKLIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPIATSSPIDFKRGAGIPAGSIEGSTQSDGWEMKSRSLSGAIHPVLQSPLQQGDLNALVTSVQSLALNVNEILNTVRNLDSRMNQLETKVDRILSSQSLIQTIKNDIVGLKAGMATLEGMITTVKIMDPGVPSNVTVEDVRKTLSNHAVVVPESFNDSFLTQSEDVISLDELARPTATSVKKIVRKVPPQKDLTGLKITLEQLAKDCISKPKMREEYLLKINQASSEAQLIDLKKAIIRSAI
Phosphoprotein D 392 Simian Virus 5 (Strain W3) MDPTDLSFSPDEINKLIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPIATSSPIDFKRGAGIPAGSIEGSTQSDGWEMKSRSLSGAIHPVLQSPLQQGDLNALVTSVQSLALNVNEILNTVRNLDSRMNQLETKVDRILSSQSLIQTIKNDIVGLKAGMATLEGMITTVKIMDPGVPSNVTVEDVRKTLSNHAVVVPESFNDSFLTQSEDVISLDELARPTATSVKKIVRKVPPQKDLTGLKITLEQLAKDCISKPKMREEYLLKINQASSEAQLIDLKKAIIRSAI
Phosphoprotein E 392 Simian Virus 5 (Strain W3) MDPTDLSFSPDEINKLIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPIATSSPIDFKRGAGIPAGSIEGSTQSDGWEMKSRSLSGAIHPVLQSPLQQGDLNALVTSVQSLALNVNEILNTVRNLDSRMNQLETKVDRILSSQSLIQTIKNDIVGLKAGMATLEGMITTVKIMDPGVPSNVTVEDVRKTLSNHAVVVPESFNDSFLTQSEDVISLDELARPTATSVKKIVRKVPPQKDLTGLKITLEQLAKDCISKPKMREEYLLKINQASSEAQLIDLKKAIIRSAI
Phosphoprotein F 392 Simian Virus 5 (Strain W3) MDPTDLSFSPDEINKLIETGLNTVEYFTSQQVTGTSSLGKNTIPPGVTGLLTNAAEAKIQESTNHQKGSVGGGAKPKKPRPKIAIVPADDKTVPGKPIPNPLLGLDSTPSTQTVLDLSGKTLPSGSYKGVKLAKFGKENLMTRFIEEPRENPIATSSPIDFKRGAGIPAGSIEGSTQSDGWEMKSRSLSGAIHPVLQSPLQQGDLNALVTSVQSLALNVNEILNTVRNLDSRMNQLETKVDRILSSQSLIQTIKNDIVGLKAGMATLEGMITTVKIMDPGVPSNVTVEDVRKTLSNHAVVVPESFNDSFLTQSEDVISLDELARPTATSVKKIVRKVPPQKDLTGLKITLEQLAKDCISKPKMREEYLLKINQASSEAQLIDLKKAIIRSAI
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-12-10
Deposition Author(s): Abdella, R. , He, Y.