6V7B
Cryo-em reconstruction of pyrobaculum filamentous virus 2 (pfv2)
PDB DOI: 10.2210/pdb6v7b/pdb
Classification: VIRUS Organism(s): Pyrobaculum Filamentous Virus 1
Deposited: 2019-12-08 Deposition Author(s): Baquero, D.P. , Egelman, E.H. , Krupovic, M. , Prangishvili, D. , Su, Z. , Wang, F.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.4 Å
Cryo-em reconstruction of pyrobaculum filamentous virus 2 (pfv2)
Baquero, D.P. , Egelman, E.H. , Krupovic, M. , Prangishvili, D. , Su, Z. , Wang, F.
Primary Citation of Related Structures: 6V7B
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| A-DNA | 1 | 323 | NA | ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA |
| A-DNA | 2 | 323 | NA | TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Structural protein VP2 | A | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | B | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | C | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | D | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | E | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | F | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | G | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | H | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | I | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | J | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | K | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | L | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | M | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | N | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | O | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | P | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | Q | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | R | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | S | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | T | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | U | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | V | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
| Structural protein VP2 | W | 145 | Pyrobaculum Filamentous Virus 1 | MSVEVYRQKIEKGGYSAAYEATRRYEREEIEVLSWSSRWESAWSKFGEAVKALGKIEGAPRALVIAKVQEALAYMSKPLPNMKLAMAAAVQAVRACEQLPGMNRERCLDAVAGALGVAKDWIRREMTGGGGGGGGGGGGGGGAVV |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2019-12-08 Deposition Author(s): Baquero, D.P. , Egelman, E.H. , Krupovic, M. , Prangishvili, D. , Su, Z. , Wang, F.