6US5
Dna polymerase i large fragment from bacillus stearothermophilus with dna template, 3'-amino primer, dgpnhpp analog, and mn2+
PDB DOI: 10.2210/pdb6us5/pdb
Classification: REPLICATION/DNA Organism(s): Geobacillus Stearothermophilus , Synthetic Construct
Deposited: 2019-10-24 Deposition Author(s): Lelyveld, V.S. , Szostak, J.W. , Zhang, W.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.25 Å
Dna polymerase i large fragment from bacillus stearothermophilus with dna template, 3'-amino primer, dgpnhpp analog, and mn2+
Lelyveld, V.S. , Szostak, J.W. , Zhang, W.
Primary Citation of Related Structures: 6US5
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase I | A | 579 | Geobacillus Stearothermophilus , Synthetic Construct | KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK |
| DNA polymerase I | D | 579 | Geobacillus Stearothermophilus , Synthetic Construct | KMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPATKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDEVTPNMRRQAKAVNYGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAVTLRVPLKVDYHYGSTWYDAK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*(C42))-3') | b | 9 | NA | GCGATCAGC |
| DNA (5'-D(*GP*CP*GP*AP*TP*CP*AP*GP*(C42))-3') | e | 9 | NA | GCGATCAGC |
| DNA (5'-D(*CP*AP*CP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3') | c | 13 | NA | CACGCTGATCGCA |
| DNA (5'-D(*CP*AP*CP*GP*CP*TP*GP*AP*TP*CP*GP*CP*A)-3') | f | 13 | NA | CACGCTGATCGCA |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-10-24 Deposition Author(s): Lelyveld, V.S. , Szostak, J.W. , Zhang, W.