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6UPH

Structure of a yeast centromeric nucleosome at 2.7 angstrom resolution

PDB DOI: 10.2210/pdb6uph/pdb

Classification: CELL CYCLE
Organism(s): Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified

Deposited: 2019-10-17
Deposition Author(s): Arthur, C.P. , Ciferri, C. , Dimitrova, Y.N. , Harrison, S.C. , Khin, Y. , Kschonsak, M. , Migl, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.7 Å

6uph
Literature

Structure of a yeast centromeric nucleosome at 2.7 angstrom resolution

Arthur, C.P. , Ciferri, C. , Dimitrova, Y.N. , Harrison, S.C. , Khin, Y. , Kschonsak, M. , Migl, D.

Primary Citation of Related Structures: 6UPH


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3-like centromeric protein CSE4 A 229 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified MSSKQQWVSSAIQSDSSGRSLSNVNRLAGDQQSINDRALSLLQRTRATKNLFPRREERRRYESSKSDLDIETDYEDQAGNLEIETENEEEAEMETEVPAPVRTHSYALDRYVRQKRREKQRKQSLKRVEKKYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQFI
Histone H3-like centromeric protein CSE4 E 229 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified MSSKQQWVSSAIQSDSSGRSLSNVNRLAGDQQSINDRALSLLQRTRATKNLFPRREERRRYESSKSDLDIETDYEDQAGNLEIETENEEEAEMETEVPAPVRTHSYALDRYVRQKRREKQRKQSLKRVEKKYTPSELALYEIRKYQRSTDLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRGQFI
Histone H4 B 118 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
Histone H4 F 118 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLYGFGG
Histone H2A C 145 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAKASQEL
Histone H2A G 145 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSGKGGKAGSAAKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAKASQEL
Histone H2B.1 D 147 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSAKASKAPASKAPAEKKPAAKKTSSSTDPSKKRTKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATESSKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA
Histone H2B.1 H 147 Kluyveromyces Lactis (Strain Atcc 8585 / Cbs 2359 / Dsm 70799 / Nbrc 1267 / Nrrl Y-1140 / Wm37) , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) , Unidentified HHHHHHENLYFQSNAMSAKASKAPASKAPAEKKPAAKKTSSSTDPSKKRTKARKETYSSYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATESSKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSSTQA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (119-MER) i 147 NA ATCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGAT
DNA (119-MER) j 147 NA ATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-10-17
Deposition Author(s): Arthur, C.P. , Ciferri, C. , Dimitrova, Y.N. , Harrison, S.C. , Khin, Y. , Kschonsak, M. , Migl, D.