6UOK
Y271g dna polymerase beta substrate complex with templating cytosine and incoming r8-oxo-gtp
PDB DOI: 10.2210/pdb6uok/pdb
Classification: TRANSFERASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2019-10-15 Deposition Author(s): Freudenthal, B.D. , Smith, M.R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.55 Å
Y271g dna polymerase beta substrate complex with templating cytosine and incoming r8-oxo-gtp
Freudenthal, B.D. , Smith, M.R.
Primary Citation of Related Structures: 6UOK
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') | b | 16 | NA | CCGACCGCGCATCAGC |
| DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') | t | 16 | NA | CCGACCGCGCATCAGC |
| DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3') | c | 10 | NA | GCTGATGCGC |
| DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(DOC))-3') | p | 10 | NA | GCTGATGCGC |
| DNA (5'-D(P*GP*TP*CP*GP*G)-3') | e | 5 | NA | GTCGG |
| DNA (5'-D(P*GP*TP*CP*GP*G)-3') | d | 5 | NA | GTCGG |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA polymerase beta | F | 335 | Homo Sapiens , Synthetic Construct | MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLGFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE |
| DNA polymerase beta | A | 335 | Homo Sapiens , Synthetic Construct | MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLGFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-10-15 Deposition Author(s): Freudenthal, B.D. , Smith, M.R.