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6UM7

Cryo-em structure of vaccine-elicited hiv-1 neutralizing antibody dh270.mu1 in complex with ch848 10.17dt env

PDB DOI: 10.2210/pdb6um7/pdb

Classification: VIRAL PROTEIN/immune system
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2019-10-09
Deposition Author(s): Acharya, P. , Haynes, B.F. , Henderson, R.C. , Saunders, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

6um7
Literature

Cryo-em structure of vaccine-elicited hiv-1 neutralizing antibody dh270.mu1 in complex with ch848 10.17dt env

Acharya, P. , Haynes, B.F. , Henderson, R.C. , Saunders, K.

Primary Citation of Related Structures: 6UM7


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein gp120 A 463 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp120 E 463 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp120 I 463 Homo Sapiens , Human Immunodeficiency Virus 1 AENLWVTVYYGVPVWKEAKTTLFCASDARAYEKEVHNVWATHACVPTDPSPQELVLGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLICSDATVKTGTVEEMKNCSFNTTTEIRDKEKKEYALFYKPDIVPLSETNNTSEYRLINCNTSACTQACPKVTFEPIPIHYCAPAGYAILKCNDETFNGTGPCSNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSENLTNNAKIIIVHLHTPVEIVCTRPNNNTRKSVRIGPGQTFYATGDIIGDIKQAHCNISEEKWNDTLQKVGIELQKHFPNKTIKYNQSAGGDMEITTHSFNCGGEFFYCNTSNLFNGTYNGTYISTNSSANSTSTITLQCRIKQIINMWQGVGRCMYAPPIAGNITCRSNITGLLLTRDGGTNSNETETFRPAGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRV
Envelope glycoprotein gp41 H 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 D 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
Envelope glycoprotein gp41 1 161 Homo Sapiens , Human Immunodeficiency Virus 1 VGRRRRRRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
DH270.mu1 Fab Heavy Chain J 251 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTDYYIHWVRQAPGQGLEWMGWINPNSGRTNSAQKFQDRVTMTRDTSITTASMELSRLTSDDTAVYYCARGGWISLYYDSSGYPNFNYWGQGSRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DH270.mu1 Fab Heavy Chain F 251 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTDYYIHWVRQAPGQGLEWMGWINPNSGRTNSAQKFQDRVTMTRDTSITTASMELSRLTSDDTAVYYCARGGWISLYYDSSGYPNFNYWGQGSRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DH270.mu1 Fab Heavy Chain B 251 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTDYYIHWVRQAPGQGLEWMGWINPNSGRTNSAQKFQDRVTMTRDTSITTASMELSRLTSDDTAVYYCARGGWISLYYDSSGYPNFNYWGQGSRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DH270.mu1 Fab Light chain K 235 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGSWAQSALTQPASVSGSPGQSITISCTGTSYDVGTYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSFRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSATVIFGGGSKMTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DH270.mu1 Fab Light chain G 235 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGSWAQSALTQPASVSGSPGQSITISCTGTSYDVGTYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSFRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSATVIFGGGSKMTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DH270.mu1 Fab Light chain C 235 Homo Sapiens , Human Immunodeficiency Virus 1 MGWSCIILFLVATATGSWAQSALTQPASVSGSPGQSITISCTGTSYDVGTYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSFRFSGSKSGNTASLTISGLQAEDAADYYCCSYAGSATVIFGGGSKMTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-10-09
Deposition Author(s): Acharya, P. , Haynes, B.F. , Henderson, R.C. , Saunders, K.