Structure of a. thaliana tbp-ac mismatch dna site
PDB DOI: 10.2210/pdb6ueo/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Arabidopsis Thaliana , Synthetic Construct
Deposited: 2019-09-22 Deposition Author(s): Schumacher, M.A.
Method: X-RAY DIFFRACTION Resolution: 2 Å
Structure of a. thaliana tbp-ac mismatch dna site
Primary Citation of Related Structures: 6UEO
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
TATA-box-binding protein 1 | A | 219 | Arabidopsis Thaliana , Synthetic Construct | MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
TATA-box-binding protein 1 | D | 219 | Arabidopsis Thaliana , Synthetic Construct | MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
TATA-box-binding protein 1 | G | 219 | Arabidopsis Thaliana , Synthetic Construct | MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
TATA-box-binding protein 1 | J | 219 | Arabidopsis Thaliana , Synthetic Construct | MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ |
Nucleic Acids / Hybrid | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') | b | 14 | NA | GCTATAAAAGGGCA |
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') | e | 14 | NA | GCTATAAAAGGGCA |
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') | h | 14 | NA | GCTATAAAAGGGCA |
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') | k | 14 | NA | GCTATAAAAGGGCA |
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') | c | 14 | NA | TGCCCCTTTATAGC |
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') | f | 14 | NA | TGCCCCTTTATAGC |
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') | i | 14 | NA | TGCCCCTTTATAGC |
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') | l | 14 | NA | TGCCCCTTTATAGC |
Method: X-RAY DIFFRACTION
Deposited Date: 2019-09-22 Deposition Author(s): Schumacher, M.A.