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6UEO

Structure of a. thaliana tbp-ac mismatch dna site

PDB DOI: 10.2210/pdb6ueo/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2019-09-22
Deposition Author(s): Schumacher, M.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

Literature

Structure of a. thaliana tbp-ac mismatch dna site

Schumacher, M.A.

Primary Citation of Related Structures: 6UEO


Proteins
Molecule Chains Sequence Length Organism Sequence
TATA-box-binding protein 1 A 219 Arabidopsis Thaliana , Synthetic Construct MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 D 219 Arabidopsis Thaliana , Synthetic Construct MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 G 219 Arabidopsis Thaliana , Synthetic Construct MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ
TATA-box-binding protein 1 J 219 Arabidopsis Thaliana , Synthetic Construct MSSHHHHHHSSGLVPRGSHMTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIYPVLSEFRKIQQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') b 14 NA GCTATAAAAGGGCA
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') e 14 NA GCTATAAAAGGGCA
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') h 14 NA GCTATAAAAGGGCA
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') k 14 NA GCTATAAAAGGGCA
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') c 14 NA TGCCCCTTTATAGC
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') f 14 NA TGCCCCTTTATAGC
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') i 14 NA TGCCCCTTTATAGC
DNA (5'-D(*TP*GP*CP*CP*CP*CP*TP*TP*TP*AP*TP*AP*GP*C)-3') l 14 NA TGCCCCTTTATAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-09-22
Deposition Author(s): Schumacher, M.A.