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6U8D
Crystal structure of hepatitis c virus ires junction iiiabc in complex with fab hcv2
PDB DOI: 10.2210/pdb6u8d/pdb
Classification: RNA/Immune System Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2019-09-04 Deposition Author(s): Huang, H. , Koirala, D. , Koldobskaya, Y. , Lewicka, A. , Piccirilli, J.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.807 Å
Crystal structure of hepatitis c virus ires junction iiiabc in complex with fab hcv2
Huang, H. , Koirala, D. , Koldobskaya, Y. , Lewicka, A. , Piccirilli, J.A.
Primary Citation of Related Structures: 6U8D
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| JIIIabc RNA (68-MER) | a | 68 | NA | GGGUCUCGCGGAACCGGUGAGUACACCGGAAUCCAGGAAACUGGAUUUGGGCGUGCCCCCGCGAGACC |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Heavy chain of Fab HCV2 | H | 233 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | EISEVQLVESGGGLVQPGGSLRLSCAASGFYISSYSIHWVRQAPGKGLEWVASIYPSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARRYRSYYSRYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT |
| Light chain of Fab HCV2 | L | 215 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYYPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2019-09-04 Deposition Author(s): Huang, H. , Koirala, D. , Koldobskaya, Y. , Lewicka, A. , Piccirilli, J.A.