PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

6U82

Crystal structure of the double homeodomain of dux4 in complex with a dna aptamer containing bulge and loop

PDB DOI: 10.2210/pdb6u82/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2019-09-04
Deposition Author(s): Aihara, H. , Shi, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.21 Å

6u82
Literature

Crystal structure of the double homeodomain of dux4 in complex with a dna aptamer containing bulge and loop

Aihara, H. , Shi, K.

Primary Citation of Related Structures: 6U82


Proteins
Molecule Chains Sequence Length Organism Sequence
Double homeobox protein 4 A 134 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHP
Double homeobox protein 4 D 134 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) GRGRRRRLVWTPSQSEALRACFERNPYPGIATRERLAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGRRGPPEGRRKRTAVTGSQTALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRARHP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (38-MER) b 38 NA GCTAATCTAATCAACCGCAGGTTGATTAGCCCATTAGC
DNA (38-MER) e 38 NA GCTAATCTAATCAACCGCAGGTTGATTAGCCCATTAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2019-09-04
Deposition Author(s): Aihara, H. , Shi, K.