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FASTA Sequence PDB Format mmCIF Format
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6TZ1

In situ structure of bmcpv rna-dependent rna polymerase at early-elongation state

PDB DOI: 10.2210/pdb6tz1/pdb

Classification: VIRAL PROTEIN, TRANSFERASE/RNA
Organism(s): Bombyx Mori Cytoplasmic Polyhedrosis Virus , Synthetic Construct

Deposited: 2019-08-09
Deposition Author(s): Cui, Y.X. , Sun, J.C. , Zhang, Y.N. , Zhou, Z.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.4 Å

6tz1
Literature

In situ structure of bmcpv rna-dependent rna polymerase at early-elongation state

Cui, Y.X. , Sun, J.C. , Zhang, Y.N. , Zhou, Z.H.

Primary Citation of Related Structures: 6TZ1


Proteins
Molecule Chains Sequence Length Organism Sequence
RNA-dependent RNA Polymerase A 1225 Bombyx Mori Cytoplasmic Polyhedrosis Virus , Synthetic Construct MLPNTELYNTIFSETRKFTRESFKEIEHLTAKLANDRVARHDFLFNNSIALISDYSGEDSNGNQLQATVTIPNEITNPKEYDPSDYPLAEDESFFKQGHKYDYLVTFRAGSLTNTYEPKTKMYKLHAALDKLMHVKQRKSRFADLWRELCAVIASLDVWYQTTNYPLRTYVKLLFHKGDEFPFYESPSQDKIIFNDKSVASILPTFVYTCCQVGTAIMSGILTHVESIVAMNHFLHCAKDSYIDEKLKIKGIGRSWYQEALHNVGRATVPVWSQFNEVIGHRTKTTSEPHFVSSTFISLRAKRAELLYPEFNEYINRALRLSKTQNDVANYYAACRAMTNDGTFLATLTELSLDAAVFPRIEQRLVTRPAVLMSNTRHESLKQKYANGVGSIAQSYLSSFTDEIAKRVNGIHHDEAWLNFLTTSSPGRKLTEIEKLEVGGDVAAWSNSRIVMQAVFAREYRTPERIFKSLKAPIKLVERQQSDRRQRAISGLDNDRLFLSFMPYTIGKQIYDLNDNAAQGKQAGNAFDIGEMLYWTSQRNVLLSSIDVAGMDASVTTNTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFEVGKRQSQVKYVNAAWQACALEAANSQTSTSYESEIFGQVKNAEGTYPSGRADTSTHHTVLLQGLVRGNELKRASDGKNSCLTTIKILGDDIMEIFQGNENDTHDHAVSNASILNESGFATTAELSQNSIVLLQQLVVNGTFWGFADRISLWTREDTKDIGRLNLAMMELNALIDDLLFRVRRPEGLKMLGFFCGAICLRRFTLSVDNKLYDSTYNNLSKYMTLVKYDKNPDFDSTLMSLILPLAWLFMPRGGEYPAYPFERRDGTFTEDESMFTARGAYKRRLLYDVSNIREMIQQNSMVLDDDLLHEYGFTGALLLIDLNILDLIDEVKKEDISPVKVNELATSLEQLGKLGEREKSRRAASDLKIRGHALSNDIVYGYGLQEKIQKSAMATKETTVQSKRVSSRLHEVIVAKTRDYKIPTMPADALHLYEFEVEDVTVDLLPHAKHTSYSNLAYNMSFGSDGWFAFALLGGLDRSANLLRLDVASIRGNYHKFSYDDPVFKQGYKIYKSDATLLNDFFVAISAGPKEQGILLRAFAYYSLYGNVEYHYVLSPRQLFFLSDNPVSAERLVRIPPSYYVSTQCRALYNIFSYLHILRSITSNQGKRLGMVLHPGLIAYVRGTSQGAILPEADNV
Viral structural protein 4 B 561 Bombyx Mori Cytoplasmic Polyhedrosis Virus , Synthetic Construct MFAIDPLKHSKLYEEYGLYLRPHQINQEIKPTTIKKKELAPTIRSIKYASLIHSMLAKHAARHNGTLINPRMYADMITLGNTKVTVTKGTPKAQIDTLKMNGLTVVSKSRRNNKKKPVSDTTATIDENTDDIVTYKALTEMSTLIESFRLPSGLALIIFDDEKYQSLIPNYINQLIAYTQPHIIPTWQGIADFSDTYLRSYFKRPFELTASNLAAPQKYNLSPMTRSIFNNTGREDAVIRKLYGYGEYVFIRYEGCLITWTGIYGEVTMMVNLSKRDLGLDVGDDYLKEYKKLLFYGVITDAIPSGISARSTIMKISPHKMMNPSGGALAVLSKFLEAVVSTNVINATLVVYAEKGAGKTSFLSTYAEQLSLASGQVVGHLSSDAYGRWLAKNKDVEEPSFAYDYVLSLDTDDNESYYEQKASELLISHGISEVAQYELLSVRKKIKMMDEMNEVLIAQLENADTHSERNFYYMVSTGKTTPRTLIVEGHFNAQDATIARTDTTVLLRTINDTTQAMRDRQRGGVVQLFLRDTYYRLLPALHTTVYPFEMLESIRRWKWVH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Transcript (5'-R(P*UP*UP*UP*UP*UP*CP*CP*CP*U)-3') m 9 NA UUUUUUUUU
Non-template RNA (5'-D(*(GTA))-R(P*GP*UP*A)-3') n 4 NA XGUA
Template RNA (5'-R(P*AP*GP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') t 11 NA AAAAAAAAAAA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2019-08-09
Deposition Author(s): Cui, Y.X. , Sun, J.C. , Zhang, Y.N. , Zhou, Z.H.